Part of scaffold_266 (Scaffold)

For more information consult the page for scaffold_266 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RFX2 ENSTTRG00000007531 (Bottlenosed dolphin)

Gene Details

regulatory factor X, 2 (influences HLA class II expression)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007124, Bottlenosed dolphin)

Protein Percentage 88.41%
cDNA percentage 90.2%
Ka/Ks Ratio 0.24707 (Ka = 0.0508, Ks = 0.2055)

RFX2 ENSBTAG00000017661 (Cow)

Gene Details

DNA-binding protein RFX2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023492, Cow)

Protein Percentage 88.14%
cDNA percentage 87.1%
Ka/Ks Ratio 0.12189 (Ka = 0.0727, Ks = 0.5962)

RFX2  (Minke Whale)

Gene Details

regulatory factor X, 2 (influences HLA class II expression)

External Links

Gene match (Identifier: BACU002579, Minke Whale)

Protein Percentage 95.51%
cDNA percentage 95.73%
Ka/Ks Ratio 0.21539 (Ka = 0.0285, Ks = 0.1325)

Genome Location

Sequence Coding sequence

Length: 1407 bp    Location:470586..496149   Strand:+
>bmy_06927
ATGGCGATTGAAAACCTCCAAAAAAGCGAAGGGATCACATCACACAAAAGCGGTTTACTCAACAGTCATCTCCAGTGGCTCTTGGATAATTACGAAACCGCGGAAGGCGTGAGTCTCCCCAGAAGTTCGCTCTACAACCACTACCTTCGCCACTGCCAGGAGTACAAGCTGGACCCCGTGAACGCGGCCTCCTTTGGGAAGCTGATCCGCTCCGTGTTCATGGGCCTGAGGACGCGGCGGCTGGGCACCAGGGGCAACTCCAAGTATCATTACTACGGGATCCGTCTGAAGCCAGACTCGCCCCTGAACCGGCTGCAGGAGGACACGCAGTACATGGCCATGCGGCAGCAGCCTGTGCATCAGAAGCCCAGGTACCGGCCAGCCCAGAAGACGGACAGCCTTGGGGAGAGCGGCTCGCACGGCAGCCTGCACAGCACACCGGAACAGGCCATGGCTGCCCAGAGCCAACACCACCAGCAGTACATCGATGTGTCCCACGTCTTCCCGGAGTTCCCGGCACCCGACCTGGGCAGTGTCCTGCTGCAGGAGAACATCACGCTGCACGACATCAAGGCCCTTCAGCTGGCCTACCGGCGGCACTGCGAGGCCACTTTAGATGTCGTGATGAACCTCCAGTTCCACTACGTTGAGAAGCTGTGGCTTTCCTTCTGGAATTCTAAAGCCTCCTCCAGCGACGGCCCTGCCTCTCTACCTGCCAGGGACGAGGAGCCGGAGGGCGCCGTCCTCCCCAAGGACAAGCTGGTATCTTTGTGCAAGTGCGACCCCGTGCTCCGGTGGATGAGGACCTGCGACCACATCCTGTACCAGGCGCTGGTGGAGATCCTCATCCCGGACGTGCTGCGGCCCGTGCCCAGTACCCTGACACAGGCCATCCGCAATTTTGCCAAGAGCTTGGAAGGCTGGTTGACGAACGCCATGAGCGACTTCCCACAGCAGGTCATCCAGACCAAGGATGGGGAGGATGGGAAAGGCCGCGAGGTGGTCTGGGAGGCTGGCAGGCCCCTCGCAGGCCGGCTCGGGGCTGGAGGGGAGCCTGGCGTCCCGGAGGTGCCAGCCCGTGTCTGCCGCCTCAGCTCCATGGTGATCCGCGACCTCACGCTGCGCAGCGCCGCCAGCTTCGGCTCCTTCCACCTCATCCGGCTGCTCTACGACGAGTACATGTTCTACCTGGTGGAGCACCGCGTCGCCGAGGCCACTGGGGAGACGCCCATTGCCGTGATGGGAGAGTTCAACGATCTTGCCTCCCTGTCGCTGACACTGCTCGACAAAGATGACCTCAGCGAGGACCGTGGAGGCAGCGAGGCCCGCTCGGAGGCCCGAGGCCGGGGCGAGCCCCTGGTGAAGCGGGAGCGTGGCGACCCCAACCACCCGCTGCAGGGCGTCTAG

Related Sequences

bmy_06927T0 Protein

Length: 469 aa      View alignments
>bmy_06927T0
MAIENLQKSEGITSHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEYKLDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPVHQKPRYRPAQKTDSLGESGSHGSLHSTPEQAMAAQSQHHQQYIDVSHVFPEFPAPDLGSVLLQENITLHDIKALQLAYRRHCEATLDVVMNLQFHYVEKLWLSFWNSKASSSDGPASLPARDEEPEGAVLPKDKLVSLCKCDPVLRWMRTCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFPQQVIQTKDGEDGKGREVVWEAGRPLAGRLGAGGEPGVPEVPARVCRLSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAEATGETPIAVMGEFNDLASLSLTLLDKDDLSEDRGGSEARSEARGRGEPLVKRERGDPNHPLQGV*