Sequence detailsbmy_06944 (Coding sequence)

Part of scaffold_266 (SequenceType object (1))

For more information consult the page for scaffold_266 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

KDM4BENSTTRG00000016902 (Bottlenosed dolphin)

Gene Details

lysine (K)-specific demethylase 4B

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016023, Bottlenosed dolphin)

Protein Percentage 96.59%
cDNA percentage 96.42%
Ka/Ks Ratio 0.07503 (Ka = 0.0088, Ks = 0.1167)

KDM4BENSBTAG00000015487 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020586, Cow)

Protein Percentage 90.92%
cDNA percentage 90.46%
Ka/Ks Ratio 0.07328 (Ka = 0.0423, Ks = 0.5767)

KDM4B (Minke Whale)

Gene Details

lysine (K)-specific demethylase 4B

External Links

Gene match (Identifier: BACU002593, Minke Whale)

Protein Percentage 97.87%
cDNA percentage 97.99%
Ka/Ks Ratio 0.14015 (Ka = 0.011, Ks = 0.0784)

Additional orthologs identified in other species via the OPTIC pipeline.

KDM4B (Human)   Kdm4b (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2520 bp    Location:1137658..1104798   Strand:-
Raw sequence 
>bmy_06944
ATGAGAAGACCCCCTTTCCTGTCTCGTGAGAGAATTTCTAGGGAGGATGGGTGCACATGCCGGAAGGACATGGTCAAGATCTCCATGGACGTCTTTGTGCGCATCCTGCAGCCGGAGCGCTACGAGCTGTGGAAGCAGGGCAAGGACCTCACGGTGCTGGACCACACGCGGCCCACGGCCCTGAGCAGCCCCGAGCTGAGCACCTGGAGTGCCTCCCGGGCCTCGCTCAAGGCCAAGCTCCTCCGCAGGTCTCACCGGAAGCGGAGCCAGCCCAAGAAGCCCAAGCCGGACGACCCCAAGTCTCCTGGCGAGGGGGCAGCTGGGACGGCCCTCCTGGAGGAGGCCGGTGGCGGCATGAAGGAGGAGGCCACACCAGAGGCCGACCCCGAGGAGGAGGAGGAGGAATCCCAGCCGCTGCCGCAGGGCCGGGAGGCCGAGGGCTCCGAAGAGGACGGGAGGGGCAAGCTGCGGCCGGCCAAGGCCAAGAGCGACCGGAAGAAGAAGAGCTATGGCCTTCCGCACCTCCACCACCCGCTCATGCCCCAGCTGCCGCCGCCCCCGCCCACCCAGTTCCCCACCGAGGAGGTGCCCCTGCTGGAGATCCCGGCACTGGCCACCGGCCCTGAGGCCGCCGAGGAGAACCCCCCGCCACCGCCCCTCAACGTGGTGCCCCCCGAAGCGCCCAGCGAGGAGCCAGAGGTGAAGCCGCGCCCCATCATCCCCATGCTGTTTGTGGTGCCGCGGCCCGGCCCGGCGGCAGGCGACAAGGGCCGCGTGTCCTGCCAGCAGGCCTCTGAGCACTTTGCCCAGAAGGGCCCCACCTGGAAGGAGCAGGCGGCCCCCATGGAGCTGACGGGGCCCGAGGAGGAGAGCGGAGTCGGCGAGGTGCAGGCTCCGTCGACCTTTTCCAAGTTGAAGATGGAGATCAAGAAGAGCCGGCGCCACCCTCTGGGCCGGCCACCCACCCGGTCCCCGCTGTCTGTGGTCAAGCAGGAGGCCTCAAGTGACGAGGAAGCCTTCCCTTTCTCCGGGGACGAGGACGTGGGTGACCCCGAGGCCTTGAGGTCTTTGCTGTCCCTGCAGTGGAAGAACAAGGCGGCCAGCTTCCAGGCCGAGAGGAAGTTCAACGCAGCGGCCGCCCTGACGGAGCCCTACTGTGCCATCTGCACCCTCTTCTACCCGTACAGCCAGGCCCTACAGACCGAGAAGGAGACTCCCCAGGGATCCCTTGGGGAGGGCCCCTCGGCCACACCGCCTTCCAAAAGCGGCCAGAAGACACGGCCGCTGATCCCCGAGATGTGCTTCACCTCCAGCGGGGAGAACACAGAGCCGCTCCCCGCCAATTCCTACATCGGCGATGACGGGACCAGCCTGCTGATCTCCTGTGCTAAGTGCTGCCTGCAGGTCCATGCCAGTTGCTACGGCATCCGCCCAGAGCTGGTCAACGAGGGCTGGACGTGTTCCCGGTGCGCGGCCCACGCCTGGACTGCGGAGTGCTGCCTGTGCAACCTCCGGGGAGGCGCCCTGCAGATGACGACTGACAGGAGGTGGATCCACGTGATCTGCGCCATCGCCGTCCCGGAAGTGCGGTTCCTGAACGTGATGGAGCGCCACCCCGTGGACATCAGCGCCATCCCCGAGCAGCGGTGGAAGCTGCCCTGGGTCTCGGAGTCACTCCCAGGAGACGGACCTGGGGGCCCGGTAGGAGGCCTCCCAGGCGCAGGGGGCGGGGGCAGAGGCACCGGGCGGAGCCCCATTGCCGCCGCCGTGTCCCCGCAGAGGTGTGTGTACTGCCGGAAGCGGATGAAGAGGGTGTCGGGCGCCTGCATCCAGTGCTCCTGCGAGCACTGCTCCACCTCCTTCCACGTGACCTGCGCCCACGCCGCCGGCGTCCTCATGGAGCCAGACGACTGGCCCTACGTTGTCTCCATCACCTGCTTCAAGCACAAGTCGGGGGGTCACACTGTCCAGATCCTGAGGGCCGTGTCCTTAGGGCAGGTGGTCATCACCAAGAACCGCAACGGGCTTTACTACCGGTGCCGCGTCATCGGCACCACCACGCAGACCTTCTACGAAGTGAACTTTGACGACGGGTCCTACAGCGATAACCTGTACCCAGAGAGCATCACTAGTAGAGACTGTGCCCGGCTGGGTCCCCCGCCCGAGGGCGAGTTTGTTGAGCTCCGGTGGACTGATGGCAACATCTACAGGGCCAAGTTCATTTCCTCTGTGACCAGTCACATCTACCAGGTGGAGTTCGAGGATGGGTCCCAGCTGACGGTGAAGCGTGGTGACATCTTCACCCTGGACGAGGAGCTCCCCAAGAGGGTCCGGTCCCGGCTGTCGGTCAGCACGGGTGCCCCGCAGGAAAATGTCTTCTCGGGAGAAGAGGTGAAGGCCGCCAAGCGCCCACGGGTGGGCACCCCTCGCGCCGCAGAGGACTCGGGGCGGAACCTGGACTACCCGGCCTTCATGGAGAGCCTCCTGCAGGCGCAGTGCTGGCCCGGAGCCCCGTTCTAG

Related Sequences

bmy_06944T0 SequenceType object (3)

Length: 840 aa      View alignments
>bmy_06944T0
MRRPPFLSRERISREDGCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALSSPELSTWSASRASLKAKLLRRSHRKRSQPKKPKPDDPKSPGEGAAGTALLEEAGGGMKEEATPEADPEEEEEESQPLPQGREAEGSEEDGRGKLRPAKAKSDRKKKSYGLPHLHHPLMPQLPPPPPTQFPTEEVPLLEIPALATGPEAAEENPPPPPLNVVPPEAPSEEPEVKPRPIIPMLFVVPRPGPAAGDKGRVSCQQASEHFAQKGPTWKEQAAPMELTGPEEESGVGEVQAPSTFSKLKMEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEAFPFSGDEDVGDPEALRSLLSLQWKNKAASFQAERKFNAAAALTEPYCAICTLFYPYSQALQTEKETPQGSLGEGPSATPPSKSGQKTRPLIPEMCFTSSGENTEPLPANSYIGDDGTSLLISCAKCCLQVHASCYGIRPELVNEGWTCSRCAAHAWTAECCLCNLRGGALQMTTDRRWIHVICAIAVPEVRFLNVMERHPVDISAIPEQRWKLPWVSESLPGDGPGGPVGGLPGAGGGGRGTGRSPIAAAVSPQRCVYCRKRMKRVSGACIQCSCEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCFKHKSGGHTVQILRAVSLGQVVITKNRNGLYYRCRVIGTTTQTFYEVNFDDGSYSDNLYPESITSRDCARLGPPPEGEFVELRWTDGNIYRAKFISSVTSHIYQVEFEDGSQLTVKRGDIFTLDEELPKRVRSRLSVSTGAPQENVFSGEEVKAAKRPRVGTPRAAEDSGRNLDYPAFMESLLQAQCWPGAPF*