Sequence detailsbmy_06954 (Coding sequence)

Part of scaffold_262 (SequenceType object (1))

For more information consult the page for scaffold_262 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BPIFCENSTTRG00000006419 (Bottlenosed dolphin)

Gene Details

BPI fold containing family C

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006074, Bottlenosed dolphin)

Protein Percentage 85.35%
cDNA percentage 92.21%
Ka/Ks Ratio 1.15782 (Ka = 0.0879, Ks = 0.0759)

BPIFCENSBTAG00000011071 (Cow)

Gene Details

BPI fold-containing family C protein precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000014700, Cow)

Protein Percentage 81.41%
cDNA percentage 87.89%
Ka/Ks Ratio 0.512 (Ka = 0.1101, Ks = 0.2151)

BPIFC (Minke Whale)

Gene Details

BPI fold containing family C

External Links

Gene match (Identifier: BACU000894, Minke Whale)

Protein Percentage 93.52%
cDNA percentage 95.87%
Ka/Ks Ratio 0.58954 (Ka = 0.0371, Ks = 0.0629)

Genome Location

Sequence SequenceType object (2)

Length: 1068 bp    Location:462415..482759   Strand:+
Raw sequence 
>bmy_06954
ATGGAGATGATTGAGCAAATGGTCAAGAAAAGAAACATCCCAGATTTAAAAGGTTCTGAATCTCTTGAATTTCTGAAAATTGATTATGTGAACTACAATTTTAAAAACATAAAAATCAATGACTTTTCACTTCCAAATACTTCACTAGCCTTTGTGCCTGGGGTGGGAATCAGGGTCCTGATCAACCACGGCACTGCCAACATCAGCACAGACTGGGAAATCAAGTCTCCACTTTTCCAAGACAGAGGAGGAGCTGACTTGTTTCTCTCTGGGGTCTACTTCACCGGTATAGTTGTCCTGGCCTGGAATGACTCTGGTCACCCAATCCTGAAGCTCCAAAACTGCTGTGCCCAAGTGAGCCACAGTGATGTCTCGTTTTCTGGAGAGCTCAGTGTCCTATATAACTCCTTTGCTGAGCCCATGGAGAAACCCATTTTAAAGAACTTAAATAAAATGCTCTGTCCCATCATCACAAGTGAGGTGGAGGCACTGAATGCCAACCTCAGCATGCTGAAGGCTTTAAGAAAGATTGACAACTATACTCTGCTGGATTATTCCCTGATCAGTTCTCCAGAAATTACTGAGAATTACGTTGATCTGAATTTGAAGGGCGTATTCCACCCCCTGGAAAACCTCACAGATCCCCCCTTCTCATCAGTTCCTTTTGTGCTCCCGGAACACAGTGACTCTATGATGTACATTGGAATCTCCGAGTATTTCTTTAAATCTGCGTCCTATGCTTATTTTACAGCTGGGGCTTTCAACGTCACTCTCACCACAAAAGAGATTTTCAACCATTTGATTCGCAACTCTCAAGGCCTTGGCAGCATGCTCTCCCGGATTGCAGAGCTGTACATCTTGTCCCAGCCCTTCATGGTAAAGGTCTTGGCAACAGAGCCTCCCGTGGTCAATTTATTACCAGGTAACTTCACCCTAGACGTCCCTGCCTCCTTCGTGATATTCACCCAGTCCAAGAACTCGACTGCGGAAACCATCGTTTCCATGGACTTTGTAAGTCTGCGGGGACAGGAGGGCAGCCTACGGATACCAGTCCTGTTCCTGCAGTAG

Related Sequences

bmy_06954T0 SequenceType object (3)

Length: 356 aa      View alignments
>bmy_06954T0
MEMIEQMVKKRNIPDLKGSESLEFLKIDYVNYNFKNIKINDFSLPNTSLAFVPGVGIRVLINHGTANISTDWEIKSPLFQDRGGADLFLSGVYFTGIVVLAWNDSGHPILKLQNCCAQVSHSDVSFSGELSVLYNSFAEPMEKPILKNLNKMLCPIITSEVEALNANLSMLKALRKIDNYTLLDYSLISSPEITENYVDLNLKGVFHPLENLTDPPFSSVPFVLPEHSDSMMYIGISEYFFKSASYAYFTAGAFNVTLTTKEIFNHLIRNSQGLGSMLSRIAELYILSQPFMVKVLATEPPVVNLLPGNFTLDVPASFVIFTQSKNSTAETIVSMDFVSLRGQEGSLRIPVLFLQ*