Part of scaffold_262 (Scaffold)

For more information consult the page for scaffold_262 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RFX4 ENSTTRG00000010688 (Bottlenosed dolphin)

Gene Details

regulatory factor X, 4 (influences HLA class II expression)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010141, Bottlenosed dolphin)

Protein Percentage 75.48%
cDNA percentage 77.39%
Ka/Ks Ratio 1.03293 (Ka = 0.0686, Ks = 0.0665)

RFX4 ENSBTAG00000025837 (Cow)

Gene Details

transcription factor RFX4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000169, Cow)

Protein Percentage 92.04%
cDNA percentage 89.81%
Ka/Ks Ratio 0.20791 (Ka = 0.0575, Ks = 0.2763)

RFX4  (Minke Whale)

Gene Details

regulatory factor X, 4 (influences HLA class II expression)

External Links

Gene match (Identifier: BACU000900, Minke Whale)

Protein Percentage 93.31%
cDNA percentage 94.8%
Ka/Ks Ratio 1.09109 (Ka = 0.0558, Ks = 0.0511)

Genome Location

Sequence Coding sequence

Length: 1164 bp    Location:1475447..1450296   Strand:-
>bmy_06969
ATGTCAAGAAAGTGCAGGACAGGGGACGTGGGCATGGAGCTCTGTGGGCACAAGGATCATAGGTGGCGGCAGGCTCCGGAGAGAGGGGGGTCTTTTCACCTAATTCACTTGATGTTTGATGACTATGTGCTCTACCTGTTAGAATCCCTGCACTCCCAGGAGCGCGCCAGTGAGCTCATGCGAGCCATGAAGGGAGAAGGAAGCACCGCAGAAGTCCGAGAGGAGATTATCTTGACGGAGGCTGCCCCACCAACCCCTTCACCAGTGCCATCGTTTTCTCCAGCAAAATCTGCCACGTCCGTGGAAGTGCCACCTCCCTCCTCCCCTGTCAGCAACCCATCCCCTGAGTACACTGGCCTCAGCACTACAGGATGGTATTTATTAATTGTTTTTAAAAGTCAGAGGGAAAAGGAAAGGCATATCAAGCACCCCAAACCACCTGATGCATGGCCAGTTTTGATTGGCTATGTCAGAGTCTGTGGCAATGCCATGAGAAGAGACTGGGTAAAAGGTTCCATTTCAACAGATTTCCACAAGTCCCTAGCACTTCCAAGGTATCCAATTAAAAAGCAAATTAATGGAATTAATAGAGCGATGCAGTCATACACGTGGTCTCTAACATACACAGTGACAACGGCGGCAGGGTCCCCAGCTGAAAACTCCCAACAGCTGCCCTGTATGAGGAGTACACACGTGCCTTCCTCCTCGGTCACACACAGGATCCCAGTTTATCCCCACAGAGACGAGCACGGATACACGGGAAGCTATAACTATGGGAGCTATGGCAACCAGCATCCTCCCCCAATGCAGAGCCAGTACCCGGCCCTCCCGCACGACACAGCCATCTCGGGACCGCTGCACTACTCCCCGTACCACAGGAGCTCCGCACAGTACCCGTTTAATAGCCCCACTTCCCGGATGGAACCTTGTTTGATGAGCAGTACTCCCAGACTGCATCCTACCCCAGTCACCCCCCGATGGCCAGAGGTGCCCACAGCCAACACGTGCTACACAAGCCCGTCTGTGCATTCCACGAGGTATGGAAACTCTAGTGACATGTACACACCCCTGACCACGCGCAGGAATTCTGAGTATGAGCACATGCAACACTTTCCTGGCTTTGCTTACATCAACGGAGAGGCCTCCACAGGATGGGCTAAGTGA

Related Sequences

bmy_06969T0 Protein

Length: 388 aa      View alignments
>bmy_06969T0
MSRKCRTGDVGMELCGHKDHRWRQAPERGGSFHLIHLMFDDYVLYLLESLHSQERASELMRAMKGEGSTAEVREEIILTEAAPPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGWYLLIVFKSQREKERHIKHPKPPDAWPVLIGYVRVCGNAMRRDWVKGSISTDFHKSLALPRYPIKKQINGINRAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRSTHVPSSSVTHRIPVYPHRDEHGYTGSYNYGSYGNQHPPPMQSQYPALPHDTAISGPLHYSPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPTANTCYTSPSVHSTRYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTGWAK*