Part of scaffold_261 (Scaffold)

For more information consult the page for scaffold_261 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SGCE ENSTTRG00000003113 (Bottlenosed dolphin)

Gene Details

sarcoglycan, epsilon

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002917, Bottlenosed dolphin)

Protein Percentage 89.26%
cDNA percentage 89.26%
Ka/Ks Ratio 0.25178 (Ka = 0.031, Ks = 0.123)

BT.30480 ENSBTAG00000021282 (Cow)

Gene Details

epsilon-sarcoglycan

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028355, Cow)

Protein Percentage 96.93%
cDNA percentage 93.46%
Ka/Ks Ratio 0.06084 (Ka = 0.0157, Ks = 0.2577)

SGCE  (Minke Whale)

Gene Details

sarcoglycan, epsilon

External Links

Gene match (Identifier: BACU016841, Minke Whale)

Protein Percentage 99.69%
cDNA percentage 99.39%
Ka/Ks Ratio 0.06593 (Ka = 0.0014, Ks = 0.0209)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 981 bp    Location:79946..116722   Strand:+
>bmy_06976
ATGACTGCTGGGAAGAAAGATGTGTACACTATTTTCTCCAAGGTGCACTCTGATCGGAATGTCTACCCATCTGCAGGTGTCCTCTTTGTTCATGTTTTGGAAAGAGAGTATTTTAAGGGGGAATTTCCACCTTACCCAAAACCTGGGGAGATTAGTAATGATCCCATAACATTTAACACAAATTTAATGGGTTACCCAGACCGGCCTGGATGGCTTCGATATATCCAAAGGACACCATACAGTGATGGAGTCCTATATGGGTCTCCAACAGCTGAAAATGTGGGGAAACCAACAGTCATTGAGATAACTGCCTACAATAGGCGTACCTTTGAGACTGCAAGGCATAATTTGATAATTAATATAATGTCAGCAGAAGACTTCCCGTTACCATATCAAGCAGAATTCTTCATTAAAAATATGAACGTAGAAGAAATGTTGGCCAGCGAGGTTCTCGGAGACTTTCTTGGGGCCGTGAAAAATGTGTGGCAGCCAGAGCGTCTGAACGCCATAAACATCACATCAGCTCTAGACAGGGGCGGCAGGGTTCCGCTTCCCATCAATGACATGAAGGAGGGCGTTTATGTCATGGTTGGTGCCGACGTCCCATTTTCTTCTTGTTTACGAGAAGTTGAAAATCCGCAGAATCAATTGAGATGCAGTCAAGAAATGGAGCCTGTAATAACATGTGATAAAAAATTTCGTACTCAATTTCACATCGACTGGTGCAAAATTTCGTTGGTTGATAAAACAAAGCAAGTGTCCACCTATCAGGAAGTGATTCGTGGAGAAGGGATTTTACCTGATGGTGGAGAATACAAACCCCCTTCCGATTCTTTGAAAAGCAGAGACTATTACACGGATTTCCTAATTACACTGGCTGTGCCCTCGGCAGTAGCATTGGTCCTTTTTCTAATACTTGCTTATATCATGTGCTGCCGACGGGAAGGAGTGGAAAAGAGAAACATGCAAACACCAGAGTAA

Related Sequences

bmy_06976T0 Protein

Length: 327 aa      View alignments
>bmy_06976T0
MTAGKKDVYTIFSKVHSDRNVYPSAGVLFVHVLEREYFKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTVIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDMKEGVYVMVGADVPFSSCLREVENPQNQLRCSQEMEPVITCDKKFRTQFHIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGEYKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPE*