Sequence detailsbmy_07004 (Coding sequence)

Part of scaffold_272 (SequenceType object (1))

For more information consult the page for scaffold_272 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SORL1ENSTTRG00000002785 (Bottlenosed dolphin)

Gene Details

sortilin-related receptor, L(DLR class) A repeats containing

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002612, Bottlenosed dolphin)

Protein Percentage 93.73%
cDNA percentage 94.18%
Ka/Ks Ratio 0.23398 (Ka = 0.0282, Ks = 0.1206)

SORL1ENSBTAG00000014611 (Cow)

Gene Details

sortilin-related receptor precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019457, Cow)

Protein Percentage 90.57%
cDNA percentage 90.1%
Ka/Ks Ratio 0.14661 (Ka = 0.053, Ks = 0.3616)

SORL1 (Minke Whale)

Gene Details

sortilin-related receptor, L(DLR class) A repeats containing

External Links

Gene match (Identifier: BACU017361, Minke Whale)

Protein Percentage 95.32%
cDNA percentage 95.9%
Ka/Ks Ratio 0.30594 (Ka = 0.0295, Ks = 0.0965)

Genome Location

Sequence SequenceType object (2)

Length: 4062 bp    Location:599561..678673   Strand:+
Raw sequence 
>bmy_07004
ATGGAAACCAACGAGCTGAACACCAACGAAGGGGAGACCTGGAAAACATTCGTCTTCTCCGAGAAGCCGGTGTTTGTGTACGGGCTCCTCACGGAGCCTGGCGAGAAGAGCACTGTCTTCACCATCTTTGGCTCCAACAAAGAGAACATCCACAGCTGGCTGATCCTCCAGGTCAATGCTACGGATGCCTTGGGGGTCCCCTGCACAGAGAACGACTACAAGCTGTGGTCCCCGTCTGATGAGCGGGGCAGCGAGTGTCTGCTGGGGCACAAGACTGTTTTCAAACGAAGGATCCCCCACGCCACGTGCTTTAACGGAGAAGACTTCGACCGGCCGGTGGTCCTGTCCAACTGCTCCTGTACCCGACAGGACTATGAATGCTATCGGAAGATTTCTGGGGACACCTGCAGTGGAGGAGATGTTGAAGTACGCCTGGAAGGAGAGCTGGTGCCATGTCCTTTGGCAGAGGAGAACGAGTTCATCCTGTACGCCATGCGCAAGTCCATCCACCGCTACGACTTGACCTCCGGAGCCACCGAGCAGCTGCCTCTCACCGGCCTGCGGGCAGCGGTGGCCCTGGATTTTGACTATGAGCGCAACTGCTTGTATTGGTCCGACCTGGCCTTGGACGTCATCCAGCGCCTCTGTTTGAACGGGAGTACAGGGCAAGAGGTGATCATCAGTTCTGGCCTGGAGACAGTAGAAGCCTTGGCTTTTGAACCCCTCAGCCAGTTACTTTACTGGGTGGATTCTGGCTTCAAAAAGATTGAGGTGGGGAATCCAGATGGCGACTTCCGACTCACGATCGTCAATTCCTCTGTGCTTGATCGGCCCAGGGCTCTGGTCCTCGTGCCCCAAGACGGGGTGATGTTCTGGACCGACTGGGGGGACCTGAGGCCTGGCATTTACCGGAGCAACATGGATGGTTCGGCTGCCTATCGTCTTGTGTCGGAGGACGTGAAGTGGCCCAATGGCATCGCCGTGGACGAGCGGTGGATCTACTGGACGGATGCCTACCTGGACTGCATCGAGCGGATCACTTTTGGCGGCCAGCAGCGCTCCGTCATCCTGGACAACCTCCCACACCCCTACGCCATTGCTGTCTTTAAGAATGAGATCTACTGGGATGACTGGTCACAGCTCAGCATATTCCGAGCTTCCAAATACAGTGGATCTGAGATGGCGATTCTGGCAAGCCGGCTCACGGGGCCCATGGACCTGAAGATTTTCTACCGGGGAAAAACAACCGGAAGCACCACCTGTGCGTCCAGGCCGTGCAGCCTGCTGTGTCTGCCCAAGGCCAACAACACGAGGAGCTGCAGGTGTCCAGAGGGTGTGTCTGGCAGTATCCTCCCGTCCGGGGACCTGATGTGTGAGTGTCCTCACGGCTATCAGCTGAAGAACCACACGTGTGTCAAAGAAGAGAACACCTGTCTCCRCAACCAGTATCGGTGCAGCAATGGGAACTGTATCAACAGCATCTGGTGGTGTGATTTTGACAACGACTGCGGGGACATGAGCGACGAGAGAAACTGCCCTACTACCATCTGTGATCTGGACACCCAGTTCCGCTGCCAGGAGTCTGGGACCTGTATCCCACTCTCCTACAAATGTGACCTTGAGGATGACTGTGGCGACAATAGCGATGAAAGTCACTGTGAAATGCACCAGTGCCGGATTGACGAATACAGCTGCAGCTCTGGCATGTGCATCCGCTCCTCCTGGGTGTGTGACGGGGACAACGATTGCAGAGACTGGTCTGACGAAGCCAACTGTACTGCCATCTATCACACCTGTGAGGCCTCCAACTTCCAGTGTCACAACGGGCACTGCATCCCCCAGCGGTGGGCGTGTGACGGTGACATGGATTGCCAAGACGGTTCTGATGAAGATCCAGTCAACTGTGAGAAGAAGTGCAACGGATTCCGCTGCCCGAATGGCACCTGCATCCCGTCCAGCAAACACTGCGATGGTCTGCACGACTGCTCGGATGGCTCAGACGAACAGCACTGTGAGCCCCTCTGTACTCGCTTCATGGACTTCGTGTGTAAGAACCGCCAGCAGTGCCTCTTCCAGTCCATGGTGTGTGATGGCATCATCCAGTGCCGCGACGGCTCGGACGAGGATGCCGTGTTTGCGGGATGCTTCCCAGGCCCCGAGTTCCACAAGGTGTGTGATGAGTTCAGTTTCCAGTGTCAGAACGGAGTGTGCATCAGTTTGATCTGGAAATGTGACGGGATGGATGACTGCGGTGATGACTCTGATGAAGCCAACTGTGAAAACCCCACGGAGGCCCCCAACTGCTCCCACTACTTCCAATTCCAGTGCGAGAATGGGCACTGCATCCCCAACAGGTGGAAATGCGACAGGGAGAACGACTGCGGGGACTGGTCTGATGAGAAGGTCTGTGCAGATTCACATATTCTTCCCTCCCCTACTCCCGGGCCCTCTACGTGTCTGCCCAATTACTACCGCTGCAGCAGTGGGGCCTGCGTGATGGACAGCTGGGTGTGTGACGGGTACCGAGATTGTGCAGACGGCTCGGATGAGGAAGGCTGCCCCTCGCCTGCCACGCGCAGCACCCTGACCTGCACAGGCCAGGAGTTCCGGTGCGAGGACGGCGAGGCCTGCATCGTGCTCTCCGAGCGCTGCGACGGCTTCCTGGACTGCTCGGACGAGAGCGACGAGCACGCCTGCAGCGGTGAGTGTGGCCCCCCAGGACCCCGGGCTCACCCTCGGCCCTGCTGGGTCAAAGTCCAGGTCCAGTGTCTGAGCAAGGTGCACAGCACCAATGACTTCGTGACCTTGAGGACTCCAGAAGGATTGCCAGACGCCCCTCAGAGCCTCCAGCTGTCGCTCCACAGGGAAGTGGAAGGAGTGATCGTGGGCCGCTGGGCCCCTCCCGCCCACAGCCACGGCCTCATTCGGGAGTACATCGTCGAGTACAGCAGGAGTGGTTCCAAGATGTGGGCCTCCCAGAGGGCTCTTAGCAACTTGACAGAAATAAGGAACCTACTGGTCAACGCTCAGTACACTGTCAGAGTGAGTGTTCGCACGCGTTTTAGCCGTCCAGGTGGTCTTGGAACATGGGGAGATGTGATCCCACCCCCAGACATCCACATTGACAGCTATGGTGAAAATTCTCTAAGCTTTACCCTGTCCGTGGACACTGACATCAAGTGTCTGGTGAGCTCTGTGAGTGTGTACTGTTCATGTAACATGGCTCTTGCTTCTTGGCAGGTGAATGGCTATGTGGTGAACATCTTCTGGGCGTTCGACACCCACAGACAGGAGAAGAGAACGTTGAACTTCCGAGGAAGCATATTGTCACACAAAGGTAGCGCCCTGGAGCTGGTCGTTGGCAACCTGACAGCTCATACAACCTACGAGATTTCTGCCTGGGCCAAGACTGACTTGGGGGACAGTCCTCTGGCATTTGAGCATGTCACGACCAGAGGAGTCCGCCCACCCGCCCCGAGCCTCAAAGCCAAGGCCATCAATCAGACGGCGGTGGAATGCACCTGGACCGGCCCCAGGAATGTGGTTTACGGCATCTTCTACGCCACGTCCTTTCTTGACCTCTATCGCAACCCCAAGAGCTTGACTACATCACAGCACAACAAAACAGTCCTTGTCAGTGGGGAAGAGCAGTATTTGTTTCTGGTCCGGGTGGTGGCGCCCTACCAGGGGCCATCCTCTGACTACGTCGTGGTGAGGATGATCCCGGATAGCAGGCTTCCTCCCCGTCACCTGCACGTGGTTCATACGGGCAAAACCTCMGCCGTCATCAAGTGGGAATCCCCATACGATTCTCCTGACCAGGACCTGCTGTATGCAATTGCAGTTAAAGATCTAATAAGGAAGAGTGACAGGAGCTACAAGGTAAAATCCCGCAACAGTACCATGGAATACGCCCTTAACAAGCTGGAGCCTGGAGGGAAATACCACGTCATTGTCCAGCTGGGGAACATGAGCAAAGACTCCAGTATCAAAATTACCACAGGTAAGCAGACGAGCGATTGGAGGCCTCCTCACCCAGCAAGGCGTTCCCAGTGCCGCTAG

Related Sequences

bmy_07004T0 SequenceType object (3)

Length: 1354 aa      View alignments
>bmy_07004T0
METNELNTNEGETWKTFVFSEKPVFVYGLLTEPGEKSTVFTIFGSNKENIHSWLILQVNATDALGVPCTENDYKLWSPSDERGSECLLGHKTVFKRRIPHATCFNGEDFDRPVVLSNCSCTRQDYECYRKISGDTCSGGDVEVRLEGELVPCPLAEENEFILYAMRKSIHRYDLTSGATEQLPLTGLRAAVALDFDYERNCLYWSDLALDVIQRLCLNGSTGQEVIISSGLETVEALAFEPLSQLLYWVDSGFKKIEVGNPDGDFRLTIVNSSVLDRPRALVLVPQDGVMFWTDWGDLRPGIYRSNMDGSAAYRLVSEDVKWPNGIAVDERWIYWTDAYLDCIERITFGGQQRSVILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSEMAILASRLTGPMDLKIFYRGKTTGSTTCASRPCSLLCLPKANNTRSCRCPEGVSGSILPSGDLMCECPHGYQLKNHTCVKEENTCLXNQYRCSNGNCINSIWWCDFDNDCGDMSDERNCPTTICDLDTQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRIDEYSCSSGMCIRSSWVCDGDNDCRDWSDEANCTAIYHTCEASNFQCHNGHCIPQRWACDGDMDCQDGSDEDPVNCEKKCNGFRCPNGTCIPSSKHCDGLHDCSDGSDEQHCEPLCTRFMDFVCKNRQQCLFQSMVCDGIIQCRDGSDEDAVFAGCFPGPEFHKVCDEFSFQCQNGVCISLIWKCDGMDDCGDDSDEANCENPTEAPNCSHYFQFQCENGHCIPNRWKCDRENDCGDWSDEKVCADSHILPSPTPGPSTCLPNYYRCSSGACVMDSWVCDGYRDCADGSDEEGCPSPATRSTLTCTGQEFRCEDGEACIVLSERCDGFLDCSDESDEHACSGECGPPGPRAHPRPCWVKVQVQCLSKVHSTNDFVTLRTPEGLPDAPQSLQLSLHREVEGVIVGRWAPPAHSHGLIREYIVEYSRSGSKMWASQRALSNLTEIRNLLVNAQYTVRVSVRTRFSRPGGLGTWGDVIPPPDIHIDSYGENSLSFTLSVDTDIKCLVSSVSVYCSCNMALASWQVNGYVVNIFWAFDTHRQEKRTLNFRGSILSHKGSALELVVGNLTAHTTYEISAWAKTDLGDSPLAFEHVTTRGVRPPAPSLKAKAINQTAVECTWTGPRNVVYGIFYATSFLDLYRNPKSLTTSQHNKTVLVSGEEQYLFLVRVVAPYQGPSSDYVVVRMIPDSRLPPRHLHVVHTGKTSAVIKWESPYDSPDQDLLYAIAVKDLIRKSDRSYKVKSRNSTMEYALNKLEPGGKYHVIVQLGNMSKDSSIKITTGKQTSDWRPPHPARRSQCR*