Part of scaffold_277 (Scaffold)

For more information consult the page for scaffold_277 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HVCN1 ENSTTRG00000015102 (Bottlenosed dolphin)

Gene Details

hydrogen voltage-gated channel 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014317, Bottlenosed dolphin)

Protein Percentage 98.31%
cDNA percentage 98.03%
Ka/Ks Ratio 0.12542 (Ka = 0.0076, Ks = 0.0605)

HVCN1 ENSBTAG00000009216 (Cow)

Gene Details

voltage-gated hydrogen channel 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012146, Cow)

Protein Percentage 94.8%
cDNA percentage 92.27%
Ka/Ks Ratio 0.07941 (Ka = 0.0251, Ks = 0.3165)

HVCN1  (Minke Whale)

Gene Details

hydrogen voltage-gated channel 1

External Links

Gene match (Identifier: BACU020287, Minke Whale)

Protein Percentage 99.13%
cDNA percentage 98.84%
Ka/Ks Ratio 0.10444 (Ka = 0.0039, Ks = 0.0374)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 753 bp    Location:157259..146016   Strand:-
>bmy_07015
ATGAGCAAGTTCTTGAAGCACTTCACCGTCGTTGGGGATGACTACCACGCGTGGAACATCAACTACAAGAAGTGGGAGAATGAAGAGGAGGAGGAGGAGGAGCAGCCACCGCCCACACCGGCCTCGGGCGAGGAGGGCAGAGCTGCTGATCCTACCACAGCGCCTGCCCCCGTGCCCAGGCCCCGCCTCGACTTCAGGACCACTTTGAGGAAGCTCTTCAGCGCCCACAGGTTTCAGGTTATCATCATCTGCCTGGTCGTTCTGGATGCCCTCCTGGTGCTCGCCGAGCTCGTTCTGGACCTGAAGATCATCCAGCCTGACAAGAACAACTATGCCGCCAGGGTGTTCCACTACATGAGCATTGCCATCTTGACCTTTTTTATGATGGAGATTTTCTTTAAAATATTTGTCTTCCGCTTGGAGTTCTTTCACCACAAGTTTGAAATCCTGGACGCCATCGTCGTGGTGGTTTCCTTCATCCTCGACGTTGTCCTCCTTTTCCGGGAGCATGAGTTTGAGGCTCTAGGGCTGCTGATTCTGCTCCGCCTGTGGCGGGTGGCCCGGATCATCAATGGGATAATTATCTCGGTTAAGACACGTTCTGAACGGCAACTACTAAGGTTAAAACAGATAAATATACAACTGGCCACCAAGATCCAGCACCTTGAATTCAGCTGCTCTGAGAAGGAACAAGAAATTGAAAGACTTAACAAGCTACTGAGACAGCATGGACTTCTTGGTGAGGGGAACTAG

Related Sequences

bmy_07015T0 Protein

Length: 251 aa      View alignments
>bmy_07015T0
MSKFLKHFTVVGDDYHAWNINYKKWENEEEEEEEQPPPTPASGEEGRAADPTTAPAPVPRPRLDFRTTLRKLFSAHRFQVIIICLVVLDALLVLAELVLDLKIIQPDKNNYAARVFHYMSIAILTFFMMEIFFKIFVFRLEFFHHKFEILDAIVVVVSFILDVVLLFREHEFEALGLLILLRLWRVARIINGIIISVKTRSERQLLRLKQINIQLATKIQHLEFSCSEKEQEIERLNKLLRQHGLLGEGN*