Part of scaffold_277 (Scaffold)

For more information consult the page for scaffold_277 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CUX2 ENSTTRG00000000945 (Bottlenosed dolphin)

Gene Details

cut-like homeobox 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000892, Bottlenosed dolphin)

Protein Percentage 94.3%
cDNA percentage 94.89%
Ka/Ks Ratio 0.22727 (Ka = 0.0216, Ks = 0.0951)

CUX2 ENSBTAG00000008571 (Cow)

Gene Details

homeobox protein cut-like 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029613, Cow)

Protein Percentage 93.47%
cDNA percentage 92.71%
Ka/Ks Ratio 0.11775 (Ka = 0.0332, Ks = 0.282)

CUX2  (Minke Whale)

Gene Details

cut-like homeobox 2

External Links

Gene match (Identifier: BACU013608, Minke Whale)

Protein Percentage 98.0%
cDNA percentage 98.67%
Ka/Ks Ratio 0.27927 (Ka = 0.0087, Ks = 0.0313)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4110 bp    Location:647816..690936   Strand:+
>bmy_07019
ATGCTGCACCAACCTCCTGCCCCAGGTGGGGAGTTGCTGGAAGAAGAGGTGTTGGATTCTAGATCTGAAGGAAGAGGAAACCCCGTGCCTGTGTTTGAGGCTTCACGCAGCCCAGACGACAGACTGCAGTCCCCCAGCTTCGACCCCAGCGGGCAGCCGCGGCGAGAGCTCCACACTTCGTGGAAGAGACACCCTGAGCTCCTCAGCCCCAAAGAACAGAGAGAGGGGACGTCGCCGGCTGGGCCCACGCTGACTGAGGGGAGCCGCCTCCCAGGCATTCCCAGCAAAGCCCTCCTGACAGAAACTTTGCTGCAGAGAAATGAGGCAGAGAAACAAAAGGGCCTTCAGGAAGTACAGGCCTTCACTTTGGCAGCCAGACTGGGGGAAGCCGAGGAGAAGATCAAGGTCCTACATTCAGCGTTAAAGGCCACACAGACAGAGCTGTTGGAGCTGCGGCGGAAATACGATGAGGAGGCGGCATCCAAGGCAGATGAAGTCGGCCTGATCATGACCAACCTGGAGAAAGCTAATCAGCGAGCCGAGGCTGCCCAGCGGGAGGTGGAAAGTCTTCGGGAACAACTTGCCTCCGTCAACAGCTCCATCCGCCTGGCCTGCTGCTCTCCTCAGGGACCCAGTGGGGATAAGGTGAACTTCGCTCTGTGCTCGGGCCCTCGGCTTGAGGCCGCCCTGGCCTCCAAGGATCGGGAGATCCTGCGGCTGCTGAAGGACGTGCAGCACCTCCAGAACTGTCTGCAGGAGCTGGAGGAGGCGTCCGCCAGCCAGATTGCAGACCTGGAGCGGCAGCTCACGGCCAAGTCCGAGGCCATCGAGAAGCTGGAAGAGAAGCTCCAGGCACAGTCTGACTATGAAGAAATTAAAACAGAGCTGAGCATCCTCAAAGCCATGAAGCTGGCCGCCAACACCTGCAGCCTCCCCCAGGGCATGGCCAAGCCCGAAGACTCCCTGCTCATGGCAAAGGAGACATTCTTCCCTGTGCAGAAATTCCTTCTGGAAAAGCCTGGTCTTTTGGCCAGCCCTGGCCCTGATGGCCCTCAGACTTTCTCGCTGTCCCCCTTCCCCAGCCTGGCTTCAGGGGAGAGACTGGCAGGGGACACGCTGCTGTCCAAGCACATGATGCCCCCGGCCGCCTTCAAGGGGGAGGCGGGAGGCCTGCTGGTGTTCCCCCCGGCCTTCTATGGCGCCAAGCCGCCCCCGGCCCCTGCCACCCCAGCCCCTGGCCCTGAGCCGCCCGGGGGCCCTGAGCCAGCGGAGGGCAGTGGCGGTGGCGTGGCCACAGCGGGGGCCGGGGCGGAGGAGGAGCAGCTGGACACGGCGGAGATCGCGTTCCAGGTGAAGGAGCAGCTGCTCAAACACAACATCGGGCAGCGGGTGTTTGGCCACTACGTGTTGGGCCTGTCCCAGGGCTCGGTCAGCGAGATCCTGGCCCGGCCCAAGCCCTGGCGCAAGCTCACGGTGAAGGGCAAGGAGCCCTTCATCAAGATGAAGCAGTTCCTGTCGGACGAACAGAATGTGCTGGCTCTGAGGACCATCCAGGTGCGGCAGCGAGGCAGTATCACCCCGAGAATCCGCACACCAGAGACCGGCTCTGATGACGCCATCAAGAGCATCCTGGAGCAGGCCAAGAAGGAGATCGAGTCACAGAAGGGGGCCCCCGCCAGCACCTCAGAAGATGCCATCAAGAACATTCTGGAACAAGCGCGCCGCGAGATGCAAGCGCAGCAGCAGGCCCTGCTGGAGATGGAGGCCGGCCCCCGCGGCCGCTCGGTGCCTTCCTCGCCCCCAGAGCGGCCCTCGCTGGCCGCCGTGAGCCAGAACGGGGCCCCGACCCACGTCAAGCAGGAGGAGAGTGGTGTCGGCGGCGGCGGTGTCAGCAGTGGGGGGACCAGCAGCAGTGCCACACAGACATCCCTCACGGTCCTGTCCCCGGCCGCCTTTGTGCAGAGCATCATCCGGAAGGTCAAGTCAGAGATCGGCGATGCCGGCTACTTCGACCACCACTGGGCCTCGGACCGCGGCCTCCTCAGCCGCCCCTACGCCTCCGTCTCGCCCTCACTCTCCTCCTCCTCCTCCAGCTACTCCGGCCAGCCCAACGGGCGGGCCTGGCCCCGTGGGGACGAGGCCCCCACGGCCCCCGAGGATGAAGCGGCCGGGAGCGAGGACGAGCCCCCCAGGGTGGGTGAGCTCAAGGCCGAGGGGGGCAGCCCCGAGGTGGGCAGCGGCGGGCGACTGGCCTACTACCCGGCCTACGTGCCCCGCACGCTGAAGCCCACCGTGCCGCCCCTGACCCCCGAGCAATACGAGCTCTACATGTACCGTGAGGTGGACACCCTGGAGCTGACGCGCCAGGTCAAGGAGAAGCTGGCCAAGAATGGAATCTGCCAGAGGATCTTCGGGGAGAAGGTGCTGGGTCTGTCACAGGGCAGTGTGAGTGACATGCTGTCCCGGCCGAAGCCGTGGAGCAAGCTGACGCAGAAGGGGCGGGAGCCCTTCATCCGCATGCAGCTGTGGCTCTCGGACCAGCTCGGCCAGGCCGTCAGCCAGCAGCCCAGCGCCTCCCAGGCCAGTCCCACTGAACCAAGGTCCTCGCCATCCCCACCCCCTAGTCCCACGGAGCCGCCGGAGAAGACATCCCAGGAGCCCCTGAGTCTGACACTGGAGAGCAGCAAGGAGAACCAGCAGCCAGAGGGACGCTCCAGCTCCTCGCTGGGTGGAAAGATGTACTCAGGCAGCCAGACCACAGGGGGCATCCAGGAGATTGTGGCCATGTCCCCCGAGCTGGACACGTACTCCATCACCAAGAGGGTCAAAGAGGTCCTCACAGACAACAACCTAGGGCAGCGGCTATTTGGGGAGAGCATCCTGGGGCTGACACAGGGCTCCGTGTCTGACCTGCTGTCCCGACCGAAACCCTGGCACAAGCTGAGCCTGAAGGGGCGGGAGCCCTTTGTGCGCATGCAGCTGTGGCTCAATGACCCCCACAAYGTGGAGAAGCTGAGGGACATGAAGAAGCTGGAGAAAAAAGCCTACCTGAAGCGCAGGTACGGCCTCATCAGCACCGGCTCAGACAGTGAGTCTCCAGCCACCCGCTCCGAGTGCCCCAGCCCCTGCCTGCAGCCCCAGGACCTGAGCCTCCTGCAAATCAAGAAGCCCCGAGTAGTGCTGGCCCCTGAGGAGAAGGAGGCACTGAGAAAGGCCTACCAGGTGGAGCCTTACCCCTCGCAGCAGACCATCGAGCTCCTCTCCTTCCAGCTCAACCTCAAGACCAACACCGTCATCAACTGGTTCCACAACTACAGGTCCCGGATGCGCCGGGAGATGTTGGTGGAGGGGACCCAAGAGGAACCAGATCTCAACCCCAGTGGGGGTCCTGGCATCCTACCGCCAGGCCACTCCCACCCAGACCCCACTCCGCAGAGCCCCAACTCTGAGGCTGAGGACCAAAAGCCTACCGTGAAGGAACTAAAGCTTCAGGAGGGTCCCGAGGAGAGCATCACACCCCTGACCACCCAGGACAAGACGCAAGTGAGGATTAAACAGGAACAGACTGAGGATGCTGAGCAAGAGGCAGGCAGCCAGGACTCAGAGGAGCTGGACAGAGGCCAAGGTTCCCCCACAGAGGTGCATCCTGACCCTCTGGGTAACGACGGACTCCCAAAAGCAGCCCCAGGGCTCCTTCTTCCAGGCGGGACCACCCCAGCCTGCCCCTCGCTACAGCCCCTCCAGGAGAGCGAGGGCGGGGAGTGGCTACACCCGGACCCTCTCAGTTTTAAGTCGGCCTCAGAGTCCTCACGCTGCAGCCTAGAGGTGTCGCTGAACTCACCCTCAGCTGCCTCCTCGCCGGGCCTCATGATGTCTGTGTCACCTGTTCCTTCCTCTTCAGCCCCCATCTCCCCATCCCCACCCGGCACCCTCCCTGCCAAAGTGCCGAGTGCCAGCCCCACTGCCGACGCAACCGGGGCCTTGCACCCCAGCACCAAGGTGAACCCCAACTTGCAGCGGCGGCACGAGAAGATGGCCAACCTGAACAGCATCATCTACCGGCTGGAGAGGGCTGCCAATCGCGAGGAGGCCCTGGAGTGGGAGTTCTAA

Related Sequences

bmy_07019T0 Protein

Length: 1370 aa      View alignments
>bmy_07019T0
MLHQPPAPGGELLEEEVLDSRSEGRGNPVPVFEASRSPDDRLQSPSFDPSGQPRRELHTSWKRHPELLSPKEQREGTSPAGPTLTEGSRLPGIPSKALLTETLLQRNEAEKQKGLQEVQAFTLAARLGEAEEKIKVLHSALKATQTELLELRRKYDEEAASKADEVGLIMTNLEKANQRAEAAQREVESLREQLASVNSSIRLACCSPQGPSGDKVNFALCSGPRLEAALASKDREILRLLKDVQHLQNCLQELEEASASQIADLERQLTAKSEAIEKLEEKLQAQSDYEEIKTELSILKAMKLAANTCSLPQGMAKPEDSLLMAKETFFPVQKFLLEKPGLLASPGPDGPQTFSLSPFPSLASGERLAGDTLLSKHMMPPAAFKGEAGGLLVFPPAFYGAKPPPAPATPAPGPEPPGGPEPAEGSGGGVATAGAGAEEEQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNVLALRTIQVRQRGSITPRIRTPETGSDDAIKSILEQAKKEIESQKGAPASTSEDAIKNILEQARREMQAQQQALLEMEAGPRGRSVPSSPPERPSLAAVSQNGAPTHVKQEESGVGGGGVSSGGTSSSATQTSLTVLSPAAFVQSIIRKVKSEIGDAGYFDHHWASDRGLLSRPYASVSPSLSSSSSSYSGQPNGRAWPRGDEAPTAPEDEAAGSEDEPPRVGELKAEGGSPEVGSGGRLAYYPAYVPRTLKPTVPPLTPEQYELYMYREVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLSDQLGQAVSQQPSASQASPTEPRSSPSPPPSPTEPPEKTSQEPLSLTLESSKENQQPEGRSSSSLGGKMYSGSQTTGGIQEIVAMSPELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVEKLRDMKKLEKKAYLKRRYGLISTGSDSESPATRSECPSPCLQPQDLSLLQIKKPRVVLAPEEKEALRKAYQVEPYPSQQTIELLSFQLNLKTNTVINWFHNYRSRMRREMLVEGTQEEPDLNPSGGPGILPPGHSHPDPTPQSPNSEAEDQKPTVKELKLQEGPEESITPLTTQDKTQVRIKQEQTEDAEQEAGSQDSEELDRGQGSPTEVHPDPLGNDGLPKAAPGLLLPGGTTPACPSLQPLQESEGGEWLHPDPLSFKSASESSRCSLEVSLNSPSAASSPGLMMSVSPVPSSSAPISPSPPGTLPAKVPSASPTADATGALHPSTKVNPNLQRRHEKMANLNSIIYRLERAANREEALEWEF*