Sequence detailsbmy_07054 (Coding sequence)

Part of scaffold_274 (SequenceType object (1))

For more information consult the page for scaffold_274 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTNENSTTRG00000008663 (Bottlenosed dolphin)

Gene Details

pleiotrophin

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008212, Bottlenosed dolphin)

Protein Percentage 95.45%
cDNA percentage 95.27%
Ka/Ks Ratio 0.5202 (Ka = 0.0402, Ks = 0.0772)

PTNENSBTAG00000002317 (Cow)

Gene Details

Pleiotrophin

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000002983, Cow)

Protein Percentage 98.81%
cDNA percentage 95.63%
Ka/Ks Ratio 0.03405 (Ka = 0.0056, Ks = 0.1647)

PTN (Minke Whale)

Gene Details

pleiotrophin

External Links

Gene match (Identifier: BACU006763, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.6%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0114)

Additional orthologs identified in other species via the OPTIC pipeline.

PTN (Human)   Ptn (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 531 bp    Location:337265..310339   Strand:-
Raw sequence 
>bmy_07054
ATGATCCTGACCACGTCCTTAAGAATGCAGACTCAACAGTACCTGCAGCAGCGTCGAAAATTTGCAGCTGCCTTCCTGGCATTTATTTTCATTTTAGCAGCTGTGGATACTGCTGAAGCAGGAAAGAAAGAGAAACCAGAAAAGAAAGTGAAGAAGTCCGACTGTGGAGAATGGCAGTGGAGTGTGTGTGTGCCCACCAGTGGGGACTGTGGGCTGGGCACCCGGGAGGGCACCCGGACCGGAGCTGAGTGTAAACAAACCATGAAGACCCAGAGATGTAAGATCCCCTGCAACTGGAAAAAGCAATTTGGAGCGGAGTGCAAATACCAGTTCCAGGCCTGGGGAGAATGTGACCTGAACACGGCCTTGAAGACCAGAACTGGAAGCCTGAAGCGAGCCCTCCACAACGCCGACTGTCAGAAGACAGTCACCATCTCCAAGCCCTGTGGCAAACTGACTAAGCCCAAACCTCAAGCAGAATCTAAGAAGAAGAAAAAGGAAGGCAAGAAACAGGAGAAGATGCTGGACTAA

Related Sequences

bmy_07054T0 SequenceType object (3)

Length: 177 aa      View alignments
>bmy_07054T0
MILTTSLRMQTQQYLQQRRKFAAAFLAFIFILAAVDTAEAGKKEKPEKKVKKSDCGEWQWSVCVPTSGDCGLGTREGTRTGAECKQTMKTQRCKIPCNWKKQFGAECKYQFQAWGECDLNTALKTRTGSLKRALHNADCQKTVTISKPCGKLTKPKPQAESKKKKKEGKKQEKMLD*