Sequence detailsbmy_07061 (Coding sequence)

Part of scaffold_274 (SequenceType object (1))

For more information consult the page for scaffold_274 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM24ENSTTRG00000012351 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 24

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011720, Bottlenosed dolphin)

Protein Percentage 86.34%
cDNA percentage 86.44%
Ka/Ks Ratio 0.39561 (Ka = 0.0129, Ks = 0.0327)

TRIM24ENSBTAG00000002431 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000003151, Cow)

Protein Percentage 96.95%
cDNA percentage 95.33%
Ka/Ks Ratio 0.12326 (Ka = 0.0175, Ks = 0.1417)

TRIM24 (Minke Whale)

Gene Details

tripartite motif containing 24

External Links

Gene match (Identifier: BACU006757, Minke Whale)

Protein Percentage 98.72%
cDNA percentage 98.59%
Ka/Ks Ratio 0.32923 (Ka = 0.0094, Ks = 0.0287)

Additional orthologs identified in other species via the OPTIC pipeline.

TRIM24 (Human)   Trim24 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3228 bp    Location:1361905..1455071   Strand:+
Raw sequence 
>bmy_07061
ATGGAGGTGGCTGTAGAGAAGGCGGCGACGGCGGCCGCGGCGGCTTCGGCGGCGGCCGCCGGGGGGCCCTCGGCTCCGCCGAGCGGGGAGAACGAGGCCGAGAGTCGGCAGGGCCCCGACTCGGAGCGCGGAGGCGAGGCGGCCCGGCTCAACCTGTTGGACACTTGCGCCGTGTGTCACCAGAACATCCAGAGCCGGGCGCCCAAGCTGCTGCCCTGCCTGCACTCCTTCTGCCAGCGCTGCCTGCCCGCGCCCCAGCGCTACCTCATGCTGCCCGCCCCCATGCTGGGCTCGGCCGAGACCCCGCCGCCCGTCCCCGCCCCCGGCTCGCCGGTCAGCGGCTCCTCGCCGTTCGCTACCCAAGATTTCAAATTTTCCCTTTTCAAAAATGGGAATTTTATTATGTTTCTGCACCAAGAATGTGCCGAGAGACACATCATAGATAATTTTTTTGTGAAGGACACTACTGAGGTTCCCAGCAGTACAGTAGAAAAGTCTAATCAGGTATGTACAAGCTGTGAGGACAATGCAGAAGCTAATGGGTTTTGTGTAGAGTGTGTTGAATGGCTCTGCAAGACATGCATCAGAGCTCATCAAAGGGTGAAATTCACAAAAGACCACACTGTGAGACAGAAAGAGGAAGTATCTCCAGAGGCAGTTGGTGTGACCAGTCAGCGACCAGTGTTTTGTCCTTTTCATAAGAAGGAGCAGCTGAAACTTTACTGTGAAACATGTGACAAACTGACATGTCGGGACTGCCAGTTATTAGAACATAAAGAGCACAGATATCAATTTATAGAAGAAGCTTTTCAGAATCAGAAAGTGATCATAGATACACTAATCACCAAACTGATGGAAAAAACAAAATACATAAAATTCACAGGAAATCAAATCCAAAACAGGATAATTGAAGTAAATCAAAATCAGAAGCAGGTGGAACAGGATATTAAAGTTGCCATATTTACATTGATGGTAGAAATAAATAAAAAAGGAAAAGCTCTACTGCATCAGCTTGAGAGTCTTGCAAAAGATCATCGAATGAAACTTATGCAACAGCAGCAGGAAGTGGCTGGACTTTCTAAACAGTTGGAACATGTCATGCATTTTTCTAAATGGGCAGTTTCCAGTGGCAGCAGTACAGCATTACTTTATAGCAAGCGACTGATTACATACCGGTTACGGCACCTCCTTCGAGCAAGGTGTGATGCTTCCCCAGTGACCAACAATACCATCCAATTTCACTGTGATCCTAGTTTCTGGGCTCAAAATATTATCAATTTAGGTTCTTTAGTAATTGAAGATAAAGAGAGTCAACCACAAATGCCTAAGCAGAATCCTGTCATGGAACAGAATTCACAGCCACCAGGTGGTTTATCTTCAAACCAGTTATCCAAGTTTCCAACACAGATCAGCCTAGCTCAATTACGACTCCAGCATATGCAGCAACAGGTAATGGCTCAGAGGCAACAGGTGCAACGGAGGCCAGCACCTGTGGGTTTACCAAACCCTAGAATGCAGGGGCCCATCCAGCAACCTTCCATCTCTCATCAGCAACCTCCTCCACGTTTGATAAATTTTCAAAATCACAGCCCCAAACCCAATGGACCAGTTCTTCCTCCTCATCCTCAACAGCTAAGATATCCACCAAACCAGAATATGCCACGACAAGCAATAAAGCCCAACCCCCTGCAGATGGCTTTCCTGGCTCAACAAGCCATAAAACAGTGGCAGATCAGCAGTGGGCAGGCCGCCCCGTCACCTGCCAACAGCACGTCCTCTACTCCGTCCAGTCCCACCATTACTAGTGCAGCAGGGTGTGATGGGAAGGCCTTTGGGTCGCCTATGATTGATCTGAGCTCACCCGTGGGAGGTCCCTATAATCTTCCTTCTCTTCCAGATATTGACTGCTCAAGTACTATTATGCTGGACAATATTGTGAGGAAAGATACTAGTACAGATCATGGCCAGCCGAGACCACCCTCAAACAGAACCGTCCAGTCACCGAATTCATCAGTGCCATCTCCAGGCCTTGCAGGACCTGTTACTATGACAAGTGTACACCCACCAATACGTTCACCTAGTGCCTCCAGCGTTGGGAGCCGAGGAAGCTCTGGCTCTTCCAGCAAACCAGCAGGAGCTGATTCTACACACAAAGTCCCAGTGGTCATGTTGGAGCCAATCCGAATAAAACAAGAAAACAGTGGACCACCTGAAAATTATGATTTTCCTGTTGTTATAGTGAAACAAGAATCAGATGAAGAATCTAGGGCTCAAAATACCAACTATCCAAGAAGCATACTCACCTCCCTGCTCTTAAATAGCAGTCAGAGCTCTGCATCTGAAGAGTCTGTGTTAAGATCAGATGCCCCTGATAGCACAGGAGATCAACCTGGACTTAACCAGGAAAATTCCTCAAATGGAAAGTCTGAGTGGCTAGATGCCTCGCAGAAGTCACCCCTTCACGTTGGAGAGACAAGGAAAGAGGATGACCCCAATGAGGACTGGTGTGCAGTTTGTCAGAACGGAGGGGAACTCCTATGCTGTGAGAAATGTCCCAAAGTATTCCACCTCTCTTGTCATGTGCCCACATTGGCAAATTTTCCAAGTGGAGAGTGGATTTGCACTTTCTGCCGAGACTTATCTAAACCAGAGGTTGAGTATGATTGTGATGCTCCCGTTCACAACTCAGAAAAAAAGAAAATTGAAGGCCTTATCAAACTAACGCCAATAGATAAAAGGAAGTGTGAACGCCTACTTTTATTTCTTTATTGCCATGAAATGAGCCTGGCTTTTCAAGACCCAGTTCCTCTAACTGTAATGATTGCTTTTTGTTTAATAATGAAGGAGAATAGTAAGAGGGGAAATGTGGTGCCTGATTATTACAAAATAATTAAAAATCCAATGGACTTGTCAACCATCAAGAAAAGACTACAAGAAGATTATTCCATGTATACAAAGCCTGAAGATTTTGTAGCTGATTTTAGATTGATCTTTCAAAACTGTGCTGAATTCAATGAGCCTGATTCAGAAGTAGCCAATGCTGGTATAAAACTTGAAAGCTATTTTGAAGAACTTCTGAAGAACCTTTATCCAGAAAAACGGTTTCCTAAAGTAGAATTCAGGAATGAATCAGAAGATAATAAATTTAGTGATGACTCAGATGATGACTTTGTACAGCCCCGGAAGAAACGCCTCAAAAGCATAGAGGAACGCCAGTTGCTTAAATAA

Related Sequences

bmy_07061T0 SequenceType object (3)

Length: 1076 aa      View alignments
>bmy_07061T0
MEVAVEKAATAAAAASAAAAGGPSAPPSGENEAESRQGPDSERGGEAARLNLLDTCAVCHQNIQSRAPKLLPCLHSFCQRCLPAPQRYLMLPAPMLGSAETPPPVPAPGSPVSGSSPFATQDFKFSLFKNGNFIMFLHQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAEANGFCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQLKLYCETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIDTLITKLMEKTKYIKFTGNQIQNRIIEVNQNQKQVEQDIKVAIFTLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVAGLSKQLEHVMHFSKWAVSSGSSTALLYSKRLITYRLRHLLRARCDASPVTNNTIQFHCDPSFWAQNIINLGSLVIEDKESQPQMPKQNPVMEQNSQPPGGLSSNQLSKFPTQISLAQLRLQHMQQQVMAQRQQVQRRPAPVGLPNPRMQGPIQQPSISHQQPPPRLINFQNHSPKPNGPVLPPHPQQLRYPPNQNMPRQAIKPNPLQMAFLAQQAIKQWQISSGQAAPSPANSTSSTPSSPTITSAAGCDGKAFGSPMIDLSSPVGGPYNLPSLPDIDCSSTIMLDNIVRKDTSTDHGQPRPPSNRTVQSPNSSVPSPGLAGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKPAGADSTHKVPVVMLEPIRIKQENSGPPENYDFPVVIVKQESDEESRAQNTNYPRSILTSLLLNSSQSSASEESVLRSDAPDSTGDQPGLNQENSSNGKSEWLDASQKSPLHVGETRKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFCRDLSKPEVEYDCDAPVHNSEKKKIEGLIKLTPIDKRKCERLLLFLYCHEMSLAFQDPVPLTVMIAFCLIMKENSKRGNVVPDYYKIIKNPMDLSTIKKRLQEDYSMYTKPEDFVADFRLIFQNCAEFNEPDSEVANAGIKLESYFEELLKNLYPEKRFPKVEFRNESEDNKFSDDSDDDFVQPRKKRLKSIEERQLLK*