Part of scaffold_282 (Scaffold)

For more information consult the page for scaffold_282 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

EDEM1 ENSTTRG00000014554 (Bottlenosed dolphin)

Gene Details

ER degradation enhancer, mannosidase alpha-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013801, Bottlenosed dolphin)

Protein Percentage 91.02%
cDNA percentage 90.68%
Ka/Ks Ratio 0.10973 (Ka = 0.005, Ks = 0.0456)

BT.55540 ENSBTAG00000012904 (Cow)

Gene Details

ER degradation-enhancing alpha-mannosidase-like 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017152, Cow)

Protein Percentage 96.65%
cDNA percentage 94.98%
Ka/Ks Ratio 0.07823 (Ka = 0.0149, Ks = 0.1906)

EDEM1  (Minke Whale)

Gene Details

ER degradation enhancer, mannosidase alpha-like 1

External Links

Gene match (Identifier: BACU020221, Minke Whale)

Protein Percentage 98.57%
cDNA percentage 98.75%
Ka/Ks Ratio 0.29242 (Ka = 0.0081, Ks = 0.0276)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2106 bp    Location:207815..181558   Strand:-
>bmy_07083
ATGCAATGGCGAGCGCTCGTCCTGGGGCTGGTGCTCCTCCGGCTTGGCCTCCACGGAGTGCTGTGGCTCGTCTTCGGGCTGGGGCCCAGCATGGGCTTCTACCAGCGCTTCCCGCTCAGCTTCGGCTTCCAGCGCCTGAGGGGCCCCGACGGCCCCGCGTCTCCCGCCTCGGGGCCCGCGGGCCGGCCCGGGACGCCCGGGGGGCCGTCGGGGCCATCGTGGCTGCAGCCGCAGGTCCCTGGGGCGGCGGCGGGGCGGCGGCGGGCTCCGCGGCGGCCCGGGCCGGACGTCTGTGGCCCGGGCCACTGGGGCTACGTGCTGGGCGGCCGGGGCCGCGGCCGGGACGAGTATGAGAAGCGCTACAGCGGCGCCTTCCCGCCGCAGCTGCGCGCCCAGATGCGCGACCTGGCGCGGGGCATGTTCGTGTTCGGCTACGACAACTACATGGCGCACGCCTTCCCCGAGGACGAGCTCAACCCCATCCACTGCCGCGGCCGAGGACCCGACCGCGGGGACCCTTCAAATCTGAACATCAATGATGTCCTAGGGAATTATTCACTGACTCTTGTTGATGCGTTGGATACACTTGCAATAATGGGAAATTCATCCGAGTTCCAGAAAGCAGTCAAGTTAGTGATCAACACAGTGTCATTTGACAAAGATTCCACCGTCCAAGTCTTTGAGGCCACGATAAGGGTCCTGGGAAGCCTTCTTTCTGCCCACAGAATAATAACTGACTCCAAGCAGCCCTTTGGTGACATGACGATTAAGGATTATGATAATGAGTTGTTGCATATGGCTCACGACCTGGCCGTGCGGCTCCTCCCTGCCTTTGAAAACACCAAGACAGGGATCCCCTACCCTCGGGTGAACCTAAAGACAGGCGTTCCTCCTGACAGCAATAATGAGACGTGCACGGCCGGCGCTGGTTCCCTGCTGGTGGAATTTGGGATTCTGAGTCGACTGCTGGGGGATTCCACGTTTGAGTGGGTGGCCAGGCGAGCTGTGAAAGCCCTTTGGAACCTGCGGAGCAACGATACGGGGTTGTTAGGTGTGGGGCACCCTGTTGAAACACTGTATGTTCAGGAAGCTTGGGCCACCCATGCTGCTGATAGGACCGATAAAGACGTGAGGGCCACGCATTCATCCCTCCTCTTTCCTGTGAGGGACGAAGGCAATGTTGTGAACATTCAGACGGGCCATTGGGTCGGAAAGCAGAGTGGCTTGGGTGCCGGACTGGACTCCTTCTATGAATACCTCTTGAAATCTTACATTCTCTTTGGAGAAAAAGAAGACCTAGAAATGTTTAATGCTGCATATAAGAGTATTCAGAACTACTTAAGAAGAGGTCGGGAAGCCTGTAACGAGGGAGAAGGGGACCCGCCCCTCTACGTCAACGTGAACATGTTCAGCGGGCAGCTGATGAACACGTGGATTGACTCGCTGCAGGCGTTCTTCCCAGGACTGCAGGTTCTGATAGGAGACGTGGAAGACGCCATCTGCCTGCACGCCTTCTACTACGCCATATGGAAGCGCTACGGGGCCCTCCCCGAGAGGTACAACTGGCAGCTGCAGGCCCCCGACGTGCTCTTCTACCCGCTGAGACCCGAGCTGGTGGAGTCCACGTATCTCCTCTACCAGGCAACCAGGAATCCCTTCTACCTCCATGTCGGAATGGACATTCTTCAGAGTCTGGAAAAGTACACAAAAGTCAAGTGTGGCTACGCTACGCTGCATCACGTCATCGACAAATCCAAAGAGGACCGGATGGAGAGCTTCTTCCTCAGCGAGACCTGTAAATACTTGTATCTGCTCTTTGATGAGGAGAATCCAGTACACAAATCTGGAACCAGATACATGTTTACAACTGAGGGACACATTATATCTGTGGATGAACATCTTCGGGAGTCACCCTGGAAGGAGTTCTTTTCTGAAGAGGGAGGGCAGGACCAAGTGGGAAAGTCCGGGCACAGGCCTAGACCTCATGAGCTAAAAGTCATCAACTCCAGCTCCAATTGCAATCGTGTTCCTGACGAGAGGCGATATTCCCTGCCCTTAAAGAGCGTCTACATGCGACAGATTGACCAGATGGTTGGCTTGATTTGA

Related Sequences

bmy_07083T0 Protein

Length: 702 aa      View alignments
>bmy_07083T0
MQWRALVLGLVLLRLGLHGVLWLVFGLGPSMGFYQRFPLSFGFQRLRGPDGPASPASGPAGRPGTPGGPSGPSWLQPQVPGAAAGRRRAPRRPGPDVCGPGHWGYVLGGRGRGRDEYEKRYSGAFPPQLRAQMRDLARGMFVFGYDNYMAHAFPEDELNPIHCRGRGPDRGDPSNLNINDVLGNYSLTLVDALDTLAIMGNSSEFQKAVKLVINTVSFDKDSTVQVFEATIRVLGSLLSAHRIITDSKQPFGDMTIKDYDNELLHMAHDLAVRLLPAFENTKTGIPYPRVNLKTGVPPDSNNETCTAGAGSLLVEFGILSRLLGDSTFEWVARRAVKALWNLRSNDTGLLGVGHPVETLYVQEAWATHAADRTDKDVRATHSSLLFPVRDEGNVVNIQTGHWVGKQSGLGAGLDSFYEYLLKSYILFGEKEDLEMFNAAYKSIQNYLRRGREACNEGEGDPPLYVNVNMFSGQLMNTWIDSLQAFFPGLQVLIGDVEDAICLHAFYYAIWKRYGALPERYNWQLQAPDVLFYPLRPELVESTYLLYQATRNPFYLHVGMDILQSLEKYTKVKCGYATLHHVIDKSKEDRMESFFLSETCKYLYLLFDEENPVHKSGTRYMFTTEGHIISVDEHLRESPWKEFFSEEGGQDQVGKSGHRPRPHELKVINSSSNCNRVPDERRYSLPLKSVYMRQIDQMVGLI*