Sequence detailsbmy_07104 (Coding sequence)

Part of scaffold_281 (SequenceType object (1))

For more information consult the page for scaffold_281 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HS6ST3ENSBTAG00000039065 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000048528, Cow)

Protein Percentage 91.27%
cDNA percentage 91.7%
Ka/Ks Ratio 0.0581 (Ka = 0.0362, Ks = 0.6236)

HS6ST3 (Minke Whale)

Gene Details

heparan sulfate 6-O-sulfotransferase 3

External Links

Gene match (Identifier: BACU017461, Minke Whale)

Protein Percentage 95.22%
cDNA percentage 97.1%
Ka/Ks Ratio 0.22112 (Ka = 0.0208, Ks = 0.094)

Additional orthologs identified in other species via the OPTIC pipeline.

HS6ST3 (Human)   Hs6st3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 693 bp    Location:582127..581435   Strand:-
Raw sequence 
>bmy_07104
ATGTTGCGGGATCCGGTGTCCCGGTACCTGAGCGAGTGGAAACACGTCCAGAGAGGAGCCACGTGGAAAACCTCCCTCCACATGTGCGATGGGAGGAGCCCCACCCCCAATGAGCTGCCTACCTGCTACCCCGGGGACGACTGGTCTGGGGTCAGCCTACGGGAATTCATGGACTGCACCTACAACCTGGCTAACAACCGCCAGGTGCGCATGCTGGCCGACCTCAGCCTGGTGGGCTGCTACAACTTGACTTTCATGAACGAGAGCGAGCGGAACGCCATCCTGCTGCAGAGCGCCAAGGGCAACCTGAAGAACATGGCCTTCTTCGGGCTCACGGAGTTCCAGCGGAAGACGCAGTTTCTCTTCGAGAGGACATTCAACCTCAAGTTCATCTCCCCCTTCACGCAGTTCAACGTCACGCGGGCTTCCAACGTGGAGATCCACGAGGGCGCCCGCCGGCGCATCGAGGAGCTCAACTTCTTGGACGTGCAGCTCTACGCGTACGCGAAGGATCTCTTCCAGCAGCGCTACCGCCGTACCAAGCAGCTGGAGCGCCGCAGGGACCGGCAAAAGCGGCGCGAGAAGCGGCGGCTGCAGCGGGAGCGCGGGGGCCACCGTCCTGTCCACAGACAGGACGGGAGCCCGGAGCGGGCAGTCACGGAGGACTACACCAGCCAGGTGGTGCGATGGTGA

Related Sequences

bmy_07104T0 SequenceType object (3)

Length: 231 aa      View alignments
>bmy_07104T0
MLRDPVSRYLSEWKHVQRGATWKTSLHMCDGRSPTPNELPTCYPGDDWSGVSLREFMDCTYNLANNRQVRMLADLSLVGCYNLTFMNESERNAILLQSAKGNLKNMAFFGLTEFQRKTQFLFERTFNLKFISPFTQFNVTRASNVEIHEGARRRIEELNFLDVQLYAYAKDLFQQRYRRTKQLERRRDRQKRREKRRLQRERGGHRPVHRQDGSPERAVTEDYTSQVVRW*