Sequence detailsbmy_07146 (Coding sequence)

Part of scaffold_286 (SequenceType object (1))

For more information consult the page for scaffold_286 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATP6V1C2ENSTTRG00000013159 (Bottlenosed dolphin)

Gene Details

ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012487, Bottlenosed dolphin)

Protein Percentage 96.36%
cDNA percentage 96.83%
Ka/Ks Ratio 0.2434 (Ka = 0.0185, Ks = 0.0758)

ATP6V1C2ENSBTAG00000001927 (Cow)

Gene Details

V-type proton ATPase subunit C 2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000032803, Cow)

Protein Percentage 93.28%
cDNA percentage 91.88%
Ka/Ks Ratio 0.14658 (Ka = 0.036, Ks = 0.2457)

Additional orthologs identified in other species via the OPTIC pipeline.

ATP6V1C2 (Human)   Atp6v1c2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1476 bp    Location:1318481..1292878   Strand:-
Raw sequence 
>bmy_07146
ATGGCCCAGAGTGTGGTGGAAGTGATGGAAGATGCAAAGGGGAAGGTCCAGGAGAACCTTCTGGCCAATGGAGCTGACTTAATGTCCTTTGTGACCCACTTCGAATGGGACATGGCCAAGTATCCTGCGAAGCAGCCGCTGGGGAGCATAGCAGACACTCTGGCAAAGCAACTGGCACAGATTGAGACGGACCTGAAGTCCCGAACGGCCGCCTACAGCGCTCTGAAGACGAATCTGGAGAACCTGGAGAAGAAATCCACGGGGAACCTCTTCACTCGGACACTGAGCGACATTGTGAGCAAAGAAGACTTTGTGTTGGATTCTGAGTATCTGATCACACTTCTGGTCATTGTTCCCAAACCAAGCTATGCACAATGGCAAAAAACCTACGAATCCCTCTCGGACATGGTGGTCCCACGGTCGACGAAGCTGATAGCTGAGGACAACGAGGGCGGCCTCTTCACCGTGACTCTGTTTCGAAAAGTGATTGACGATTTCAAAACCAAAGCCAAAGAGAATAAGTTCACTGTCCGTGAATTTTACTATGATGAAAAAGAAATTAAAAGGGAAAGGGAAGAGATGACCAGATTGCTGTCGGATAAGAAGCAACAATACCAAACTTCCTGTGTTGCTCTTAAAAAGGGATCATCCACCTTCCCGGACCACAAGGTTAAGGTAACCCCGCTAGGGAACCCTGATAGGCCCGCTGCGGGGCAGAACGACAGAGAGAGAGAGAGTGAGGGCGAGGGTGAGGGCCCGCTGCTGCGATGGCTCAAGGTGAACTTCAGCGAAGCCTTTATTGCCTGGATCCACATCAAGGCACTGAGAGTGTTTGTGGAGTCTGTGCTCAGGTATGGATTGCCAGTGAACTTCCAGGCGGTTCTCCTCCAGCCTCATAAGAAGTCATCCACCAAACGTTTAAGAGAGGTTCTGAACTCCGTCTTCAGACATCTGGATGAAGTCGCAGCCACAAGTATATTGGATCCATCCGTGGAGATCCCTGGATTGCAACTCAGCAACCAAGACTACTTTCCTTATGTCTATTTCCATATCGACCTTGCCAGAGAAGAGTTCAAGTATCCTACAGAATTTAAATTTTTAGAGAAATTGCTCACAAAAATTAGTTACAGTTTTACAGTAAAGAAATGTTCTCAATCCTTTGAATTGTCTCTTCATTTACATTCTAACATAATTCAAAACTTCCCTTTTCTGAATGATCACATTAAAAAACTTGTACGTAAGAAACAGCCTCCAAGAACATTTAAGCAGCAGTCAGAGGGAGGGAAAGATGCTTCAACAGCCCATCAGTTTTCTTCAAAGTATTATTTGACAGAATACAACCCAATTCACCGGCTACAACAATTCACAGAATTTTTCATTGTTTTCTTGAGACGCAAAAGTTCACTGCTGCAGTGTTTTCAAATGACCAATCAGTGTTACTTCTTGGTTAAAAAGGCCACTGGTAGATTCATCTGA

Related Sequences

bmy_07146T0 SequenceType object (3)

Length: 492 aa      View alignments
>bmy_07146T0
MAQSVVEVMEDAKGKVQENLLANGADLMSFVTHFEWDMAKYPAKQPLGSIADTLAKQLAQIETDLKSRTAAYSALKTNLENLEKKSTGNLFTRTLSDIVSKEDFVLDSEYLITLLVIVPKPSYAQWQKTYESLSDMVVPRSTKLIAEDNEGGLFTVTLFRKVIDDFKTKAKENKFTVREFYYDEKEIKREREEMTRLLSDKKQQYQTSCVALKKGSSTFPDHKVKVTPLGNPDRPAAGQNDRERESEGEGEGPLLRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVNFQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDPSVEIPGLQLSNQDYFPYVYFHIDLAREEFKYPTEFKFLEKLLTKISYSFTVKKCSQSFELSLHLHSNIIQNFPFLNDHIKKLVRKKQPPRTFKQQSEGGKDASTAHQFSSKYYLTEYNPIHRLQQFTEFFIVFLRRKSSLLQCFQMTNQCYFLVKKATGRFI*