Sequence details bmy_07173 (Coding sequence)

Part of scaffold_292 (Scaffold)

For more information consult the page for scaffold_292 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRIT3 ENSTTRG00000004640 (Bottlenosed dolphin)

Gene Details

leucine-rich repeat, immunoglobulin-like and transmembrane domains 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004359, Bottlenosed dolphin)

Protein Percentage 98.26%
cDNA percentage 98.12%
Ka/Ks Ratio 0.27866 (Ka = 0.0086, Ks = 0.0309)

LRIT3 ENSBTAG00000007019 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009238, Cow)

Protein Percentage 88.94%
cDNA percentage 90.63%
Ka/Ks Ratio 0.3033 (Ka = 0.0593, Ks = 0.1955)

Additional orthologs identified in other species via the OPTIC pipeline.

LRIT3 (Human)  

Genome Location

Sequence Coding sequence

Length: 1380 bp    Location:526482..529296   Strand:+
Raw sequence 
>bmy_07173
ATGGCATTGTCAAAAGTCGCCGACCCTGTGGTAGTACTTCTCGATCCACTGATGGTTTGTAGTGAACCGGAACGCCTCACAGGGATTTCGTTTCAGCGGGCTGAGCTGGAGCAGTGTCTGAAGCCATCGGTGATGACCTCGGCCACCCAGATCACRTCTGCTCTGGGCAGTAACGTTCTGCTGCGGTGTGATACCACTGGCTACCCTACCCCGCAGCTCACCTGGACCAGACCAGACAGCTCGCCAGTTAATTATACAGTAATTCAGGAATCTCCAGGGGAGGGAGTCAGATGGTCCATAATAAGCTTGACAGGCATTTCTTACATGGATGCTGGGGATTACAAATGTAAGGCCAAAAATTTGGCTGGGATGTCAGAAGCTGTGGTTACTGTGACAGTGGTTGGTGTTGTCATGACCACCGTATCATCAGAAACTTCTGAAAGAAGAACTGGGGATCACCCTGAGCAAGAGGTCCAGCTGGGATCTAGAACATCTGCATCTCTACCTGGTTCATCATCATCTCCCTGGCCTTATTCCTCTTCTTCTTCCTTCCCAGCTTCTTCCACTTTTCTTCCTACTTCTACTTCATCTCCTCCCTCCACTGCTTCCTTCTCCTTATCTCCTTTCTTCTCCTCCATTGTTTCTTCAGCCACAACTCCAAGCACTAGAATATCTACAAGTACTACCATGGCCAGCCGTCAGTCACTCCACCCAGATGGGAAAAGAAATGTCAAGGTGGAGATGGGTAGCGGTAAGCTTCCCCCAGCTAGTGCAAGTAAAAGAGAAGAGTTGGCATTGTTGGATCARGCCCTGCCGATGGAAACGAATGCCACAATAGAAAATCTCCAGGTAGTCAGCGAAACCGAAGAAAGCGTGATCTTGATGTGGAACACCATTAACACCACGCAGAATTTGGAAGTGACTGTGTTGTATTCCAAGTATGGTGAGAAGGACCTGCTACTGCTTAATGCAGACTCCAGCAAGAACCAAGTCACCATAAGTGGCTTGTTGCCTGATCGGCAATATATAGCATGTGTCTGTCCAAAAGGAATGCCTCCCCAGAAAGACCAATGTATCACCTTTTCTACTGACAGAGTTGAAGAAGAAGGTGATTCTCAAGGGTCTTTCCTTATGGTGGTGAGTGGTGCTGCCTGTGTTGTTGTCTTGCCATTGATTTTTTTCCTGTTGTACAAAGTTTGCAAACTTCAGTGTAAGTCAGACTCCCTCTGGGAAGATGATTTGGCGAAAGAGACTTAYATCCAATTTGAAACGCTGTCCCCCCGSTCTCAAAGTGTAGGGGAACTTTGGACGCGAAGGCCCAGAGACGATTCAGAAAAACTGCTGCTTTGCTCTARGTCAAGTGTGGAATCTCATGACTTT

Related Sequences

bmy_07173T0 Protein

Length: 460 aa      View alignments
>bmy_07173T0
MALSKVADPVVVLLDPLMVCSEPERLTGISFQRAELEQCLKPSVMTSATQITSALGSNVLLRCDTTGYPTPQLTWTRPDSSPVNYTVIQESPGEGVRWSIISLTGISYMDAGDYKCKAKNLAGMSEAVVTVTVVGVVMTTVSSETSERRTGDHPEQEVQLGSRTSASLPGSSSSPWPYSSSSSFPASSTFLPTSTSSPPSTASFSLSPFFSSIVSSATTPSTRISTSTTMASRQSLHPDGKRNVKVEMGSGKLPPASASKREELALLDQALPMETNATIENLQVVSETEESVILMWNTINTTQNLEVTVLYSKYGEKDLLLLNADSSKNQVTISGLLPDRQYIACVCPKGMPPQKDQCITFSTDRVEEEGDSQGSFLMVVSGAACVVVLPLIFFLLYKVCKLQCKSDSLWEDDLAKETYIQFETLSPRSQSVGELWTRRPRDDSEKLLLCSXSSVESHDF