Part of scaffold_292 (Scaffold)

For more information consult the page for scaffold_292 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

EPDR1 ENSTTRG00000004098 (Bottlenosed dolphin)

Gene Details

ependymin related protein 1 (zebrafish)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003859, Bottlenosed dolphin)

Protein Percentage 97.31%
cDNA percentage 97.46%
Ka/Ks Ratio 0.17116 (Ka = 0.0125, Ks = 0.0728)

EPDR1 ENSBTAG00000033197 (Cow)

Gene Details

Mammalian ependymin-related protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044382, Cow)

Protein Percentage 93.56%
cDNA percentage 92.99%
Ka/Ks Ratio 0.14603 (Ka = 0.0335, Ks = 0.2295)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 735 bp    Location:959914..994186   Strand:+
>bmy_07179
ATGCCGGGACGCGCTCTCCTCCGCGTGGCCCGAGGGGCCCTGGGCGCCTGGCTGCTGGGCGGCCTCTGGGTCTGGGCGCTGGGCGGCCTCTGCGGCCTGGGGGCGGCGGCGCCGCGGCCCGGGGCCGGGGGCTCCCCGGGGGCTCAGCGCCCGTGCCAGGCGCCGCAGCAGTGGGAAGGGCGCCAGGTGCTGTACCGGCAGAGCACCGGGCGCTACAGCCGCGCCCTGCTCTCCTACGACGGACTCAACCAACGCGTGCGGGTGCTGGACGAGAGGAAGGCGCTGATCCCCTGCAAGAGTCCTGAACTGTTCTCTTTCAATCTGTCTTCCAGATTATTTGAATATATTTTGCTCTATAAGGATGGAGTGATGTTTCAGATTGAACAAGCCACCAAGCAGTGCTCCAAGATCACCCTGACATACCCCTGGGACCCTCTAGACATTCCTCAGAACTCCACCTTTGARGACCAGTACTCCATTGGGGGACCCCAGGAGCAGATCACCGTCCAGGAGTGGTCGGACAGAAAGTCAGCCAGATCGTATGAAACCTGGATTGGCATTTATACAGTCAAGGATTGTTATCCTGTCCAGGAAACCTTCACCAAAAATTACAGTGTGATATTGTCCACACGGTTTTTCGACATACAGCTGGGCATTAAAGACCCCTCGGTGTTTACCCCGCCAAGCACGTGCCAGACAGCCCAGCCGGAGAGGATGAGCGAGGACTGCTCCTGA

Related Sequences

bmy_07179T0 Protein

Length: 245 aa      View alignments
>bmy_07179T0
MPGRALLRVARGALGAWLLGGLWVWALGGLCGLGAAAPRPGAGGSPGAQRPCQAPQQWEGRQVLYRQSTGRYSRALLSYDGLNQRVRVLDERKALIPCKSPELFSFNLSSRLFEYILLYKDGVMFQIEQATKQCSKITLTYPWDPLDIPQNSTFEDQYSIGGPQEQITVQEWSDRKSARSYETWIGIYTVKDCYPVQETFTKNYSVILSTRFFDIQLGIKDPSVFTPPSTCQTAQPERMSEDCS*