Part of scaffold_290 (Scaffold)

For more information consult the page for scaffold_290 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATPAF1 ENSTTRG00000011913 (Bottlenosed dolphin)

Gene Details

ATP synthase mitochondrial F1 complex assembly factor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011300, Bottlenosed dolphin)

Protein Percentage 91.05%
cDNA percentage 90.84%
Ka/Ks Ratio 0.22485 (Ka = 0.0204, Ks = 0.0909)

ATPAF1 ENSBTAG00000000094 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000104, Cow)

Protein Percentage 92.93%
cDNA percentage 93.78%
Ka/Ks Ratio 0.26607 (Ka = 0.0381, Ks = 0.1432)

ATPAF1  (Minke Whale)

Gene Details

ATP synthase mitochondrial F1 complex assembly factor 1

External Links

Gene match (Identifier: BACU019874, Minke Whale)

Protein Percentage 95.24%
cDNA percentage 97.17%
Ka/Ks Ratio 0.91064 (Ka = 0.0265, Ks = 0.029)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1020 bp    Location:103835..132315   Strand:+
>bmy_07205
ATGGAGTGGGCGCGCGGGCCGCGGGCCGAGGCCGACGCGCCTGGGGAGGAGGAGGACGAGGAGGCGGGGGCGGCTATGGCTGCCGTGGTGGCGGCAGCGGGTGGCGCGGGCCCGGCCGTCCTGCAGGTGGCCGGCCTCTACCGCGGCCTGTGCGCGGTGCGCAGCCGCGCYCTGGGCCTGGGGCTCGTGTCACCCGCGCAGCTGCGCGTGTTCCCGGTGCGCCGCGGCTCGGGCCGGCCCGCGGGGGGCGCCGAAGGCAGTGGTGTCGGGAACGAGATCGAGGCCAACCCCTTCTACGACCGCTACCGCGACAAGATCCAGCAGCTGCGCAGCATGATATTAACATANGCTTTTGAGTCCCGACTGGAGAAGTGCAGTGAGTTTCGGAAGCAACCAGTGGGGCACTCCAAGCAAGGTGACTTTATCAAATGTGTGGAACAGAAGACAGACACATTGGGGAAACAGCGTATGAGCAGAGGATTCACCAAGGACAAGACTCTCAGTTCAATCTTTAACATTGAGATGGTGAAAGACAAAACTGCAGAAGAAATAAAACAGATTTGGCAGCTGTATTTTGCAGCAAAAGATACAGTCTACGCAGTTATTCCTAAAGAGAAGTTTGATTTGATCTGGAACCGGGCTCAGTCCTGTCCAACATTTCTGTGTGCACTACCAAGAAGGGAAGGTTATGAGTTTTTTGTCGGGCAGTGGACAGGTACTGAACTCCACTTCACTGCACTTATAAATATTCAGACCCGAGGGGAAGCTGCAGCCAGCCAGCTGATTTTATATCACTACCCTGAACTTAAGGAAGAAAAGGGCATAAATGTTGCTGAGGCACAGTGCATTGCCAACCAAGTTCAGCTCTTCTATGCCACTGATCGAAGAGAAACCTACGGGTTAGTGGAGRCCTTTAACTTCAGACCAAATGAGTTCAAGTATATGTCTGTCATCGCTGAATTGGAACAAAGCGGACTTGGAGCAGAACTGAAATGTTCTCAGAACCAGGATAAGACTTAG

Related Sequences

bmy_07205T0 Protein

Length: 340 aa      View alignments
>bmy_07205T0
MEWARGPRAEADAPGEEEDEEAGAAMAAVVAAAGGAGPAVLQVAGLYRGLCAVRSRALGLGLVSPAQLRVFPVRRGSGRPAGGAEGSGVGNEIEANPFYDRYRDKIQQLRSMILTXAFESRLEKCSEFRKQPVGHSKQGDFIKCVEQKTDTLGKQRMSRGFTKDKTLSSIFNIEMVKDKTAEEIKQIWQLYFAAKDTVYAVIPKEKFDLIWNRAQSCPTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGEAAASQLILYHYPELKEEKGINVAEAQCIANQVQLFYATDRRETYGLVEXFNFRPNEFKYMSVIAELEQSGLGAELKCSQNQDKT*