Sequence detailsbmy_07217 (Coding sequence)

Part of scaffold_290 (SequenceType object (1))

For more information consult the page for scaffold_290 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POMGNT1ENSBTAG00000013322 (Cow)

Gene Details

protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000040690, Cow)

Protein Percentage 97.68%
cDNA percentage 95.77%
Ka/Ks Ratio 0.06739 (Ka = 0.0106, Ks = 0.1579)

Additional orthologs identified in other species via the OPTIC pipeline.

POMGNT1 (Human)   Pomgnt1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1941 bp    Location:497762..506490   Strand:+
Raw sequence 
>bmy_07217
ATGGACGATTGGAAGCCCAGCCCCCTCATCAAGCCCTTTGGGGCTCGGAAAAAGCGGAGCTGGTATCTTACCTGGAAGTATAAACTGACCAACCAGCGGGCCCTGCGGAGATTCTGTCAGACAGGAGCTGTGCTTTTCCTACTGGTGACCGTCATTGTCAACATCAAGTTGATCCTGGACACGCGGAGAGCAATCAGCGAGGCCAATGAAGACCCAGAGCCAGAAAAAGACTATGATGAGGCCCTGGGCCGACTGGAGTCCCCACGGCGCAGAGGCAGTGGTCCCCGACGGGTCCTGGATGTGGAGGTATACTCAAGCCGCAGCAAAGTGTATGTGGCAGTGGACGGCACTACGGTGCTGGAGGATGAGGCCCGGGAGCAGGGCCGGGGCATCCATGTCATCGTCCTCAACCAGGCCACGGGCCATGTGATGGCAAAGCGGGTGTTTGACACGTACTCGCCTCATGAGGATGAGGCCATGGTGCTGTTCCTCAACATGGTGGCACCTGGCCGAGTGCTCATCTGCACCGTCAAGGATGAGGGCTCCTTCCACCTCAAGGACACAGCCAAGGCTCTGCTGAGGAGCCTAGGCAGCCAGGCCGGCCCTGCCCTGGGCTGGAGGGACACGTGGGCCTTCGTGGGACGAAAAGGAGGTCCTGTCCTCGGGGAGAAACATTCTAAGTCACCTGCCCTCTCCTCCTGGGGGGATCCAGTCCTACTGAAGACAGATGTGCCGCTGAGCTCAGCTGAAGAAGCAGAGTGCCACTGGGCAGACACAGAGCTGAACCATCGCCGCCACCGCTTCTGCAGCAAAGTCGAGGGCTATGGGAGTGTGTGCAGCTGCAAGGACCCCACACCCATCGAGTTCAGCCCTGACCCACTCCCAGACAACAAGGTCTTCAATGTGCCTGTGGCTGTCATTGCAGGGAACCGGCCCAATTACCTGTACCGGATGCTGCGCTCTCTACTCTCAGCCCAGGGGGTGTCTCCCCAGATGATAACAGTTTTCATCGACGGCTACTATGAGGAGCCGATGGATGTGGTGGCGCTGTTTGGTCTGAGGGGCATCCAGCACACTCCCATCAGCATCAAGAACGCCCGTGTGTCTCAGCACTACAAGGCCAGCCTCACTGCCACTTTCAACCTGTTTCCGGAAGCCAAGTTTGCTGTAGTTCTGGAAGAGGACCTGGACATCGCTGTGGATTTTTTCAGCCTGTACTGTATCTCTGCCTGGAATGACCAGGGGTATGAACACACGGCTGAGGACCCAGCACTGCTGTACCGCGTGGAGACCATGCCTGGGCTGGGATGGGTGCTCAGGAAGTCCTTGTACAAGGAGGAGCTTGAGCCCAAGTGGCCCACACCGGAAAAGCTCTGGGACTGGGATATGTGGATGCGGATGCCGGAACAACGCCGAGGCCGAGAGTGCATCATCCCTGACATTTCCCGATCCTACCACTTTGGCATCGTTGGCCTCAACATGAATGGCTACTTCCATGAGGCCTACTTTAAGAAGCACAAGTTCAACACGGTTCCAGGTGTCCAGCTGAGGAACGTGGACAGTCTGAAGAAAGAAGCGTATGAAGTGGAAGTTCACAGACTGCTCAGTGAAGCTGAGGTTCTGGACCACAGCAAAAACCCTTGTGAAGACTCTTTCCTGCCAGACACAGAGGGCCACACCTATGTGGCCTTTATCCGAATGGAGAAGGATGATGACTTCACCACCTGGACCCAGCTTGCCAAGTGCCTCCATATCTGGGACCTGGATGTACGTGGCAACCACCGGGGCCTGTGGAGATTGTTTCGGAAGAGGAACCACTTCCTGGTGGTGGGGGTCCCAGCCTCCCCCTACTCAATGAAGAAGCCACCATCAACCACCCCAATTTTCTTGGAGCCACCCCCAAAAGAGGAGGGAGCCCCAGGAGCTGCAGAACAGACATGA

Related Sequences

bmy_07217T0 SequenceType object (3)

Length: 647 aa      
>bmy_07217T0
MDDWKPSPLIKPFGARKKRSWYLTWKYKLTNQRALRRFCQTGAVLFLLVTVIVNIKLILDTRRAISEANEDPEPEKDYDEALGRLESPRRRGSGPRRVLDVEVYSSRSKVYVAVDGTTVLEDEAREQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNMVAPGRVLICTVKDEGSFHLKDTAKALLRSLGSQAGPALGWRDTWAFVGRKGGPVLGEKHSKSPALSSWGDPVLLKTDVPLSSAEEAECHWADTELNHRRHRFCSKVEGYGSVCSCKDPTPIEFSPDPLPDNKVFNVPVAVIAGNRPNYLYRMLRSLLSAQGVSPQMITVFIDGYYEEPMDVVALFGLRGIQHTPISIKNARVSQHYKASLTATFNLFPEAKFAVVLEEDLDIAVDFFSLYCISAWNDQGYEHTAEDPALLYRVETMPGLGWVLRKSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGRECIIPDISRSYHFGIVGLNMNGYFHEAYFKKHKFNTVPGVQLRNVDSLKKEAYEVEVHRLLSEAEVLDHSKNPCEDSFLPDTEGHTYVAFIRMEKDDDFTTWTQLAKCLHIWDLDVRGNHRGLWRLFRKRNHFLVVGVPASPYSMKKPPSTTPIFLEPPPKEEGAPGAAEQT*