Sequence detailsbmy_07218 (Coding sequence)

Part of scaffold_290 (SequenceType object (1))

For more information consult the page for scaffold_290 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSPAN1ENSTTRG00000013174 (Bottlenosed dolphin)

Gene Details

tetraspanin 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012502, Bottlenosed dolphin)

Protein Percentage 89.21%
cDNA percentage 91.7%
Ka/Ks Ratio 0.60632 (Ka = 0.028, Ks = 0.0461)

Additional orthologs identified in other species via the OPTIC pipeline.

TSPAN1 (Cow)   TSPAN1 (Human)   Tspan1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 726 bp    Location:518876..508941   Strand:-
Raw sequence 
>bmy_07218
ATGCAGTGCTTCAGCTTCATTAAGACCATGATGATCCTCTTCAATATGCTCATCTTTCTGTGTGGTGTGGCCCTGTTGGCAGTGGGCATCTGGGTGTCAGTCGACGGACCATCCTTCATGAAGATCTTCGGGCCACTATCATCCAGTGCCATGCAGTTTGTCAACGTGGGCTACTTCCTCATCGCAGCTGGCGCTGTGCTCTTCGCTCTTGGTTTCCTGGGCTGCTATGGTGCCCAGACTGAGAACAAGTGTGCCCTCATGATGTTCTTCTTCATCCTCCTCGTCATCTTCATTGCTGAGGTTGCAGCTGCTGTGGTTGCCTTGGTGTACACCACAACGGCTGAGAACTTCCTGACGTTGATGGTAGTGCCCACCATCAAGAAAGAGTACGGTTCCCAAAAAGACTTCACCCAAGTGTGGAACTCCACCATGGAAGGGCTCAAGTGCTGTGGCTTCAACAACTACACAGATTTTGAGGACTCTCCCTATGTAAAAGAGAACAACGTCTTTCCCCGATACTGTTGCTTTGACCATGACAATGGCACATTAGTGGAACCCTGCACTAGTGTCGAGGCCCAGTACCAGAAAGTAGAGGGTTGCTTCAATCAGCTTCTGTATGACATCAAAACCAATGCAGTTACCGTGGGTGGTGTGGCAGCCGGAATTGCGGGCTTGGAGCTGGCTGCCATGATTGTGTCCATGTATCTGTACTGCAATCTGAAATAA

Related Sequences

bmy_07218T0 SequenceType object (3)

Length: 242 aa      
>bmy_07218T0
MQCFSFIKTMMILFNMLIFLCGVALLAVGIWVSVDGPSFMKIFGPLSSSAMQFVNVGYFLIAAGAVLFALGFLGCYGAQTENKCALMMFFFILLVIFIAEVAAAVVALVYTTTAENFLTLMVVPTIKKEYGSQKDFTQVWNSTMEGLKCCGFNNYTDFEDSPYVKENNVFPRYCCFDHDNGTLVEPCTSVEAQYQKVEGCFNQLLYDIKTNAVTVGGVAAGIAGLELAAMIVSMYLYCNLK*