Part of scaffold_290 (Scaffold)

For more information consult the page for scaffold_290 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC17 ENSTTRG00000012199 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 17

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011565, Bottlenosed dolphin)

Protein Percentage 92.7%
cDNA percentage 94.96%
Ka/Ks Ratio 0.72289 (Ka = 0.0475, Ks = 0.0656)

CCDC17 ENSBTAG00000008808 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011601, Cow)

Protein Percentage 82.11%
cDNA percentage 87.9%
Ka/Ks Ratio 0.64509 (Ka = 0.1172, Ks = 0.1817)

CCDC17  (Minke Whale)

Gene Details

coiled-coil domain containing 17

External Links

Gene match (Identifier: BACU019914, Minke Whale)

Protein Percentage 94.75%
cDNA percentage 95.45%
Ka/Ks Ratio 0.59831 (Ka = 0.0397, Ks = 0.0663)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2139 bp    Location:1003373..1015092   Strand:+
>bmy_07224
ATGGCCTCCCACTCCAGGGAGCCAGGGCTCCTGCCCTGTGGGTCCTGTGACATGGTTTTCCGTTCCTGGGCCCTGCTGGCCACCCACACTCAGCGCTTCTGCATTGGCCGTCAGCCCCGGGAGCTGACAGTTGGAGAACAGCCCCCAATAGCCACTGAACCACGGGTACCCAGGAGGATTCCTCACCCCACACCCTGTACCCAGGTTGTGCCACAAGAACACCAGGGCCTCCCAGACCAGGAGGCCAGCAAATCGGCTCTGAAGAGGCTAACAGATGAGATCACGCGTGGGTCAGATTACCGCAACATAGAGATTGCGGGTTACTGTTACCTCCAGGTGCAGCGGCTGCGGCTGTACCTGCAGGAAATGCGACCCAGCATAACAGAGGTCCCCAGCGGGTCACAGGGGCCCTGGAGGCGGTCAGAGGCACCGACTCAGGGTCCCAACTACGAGGCTGCTGGGAGCCCCGGCGAGCGGCTGCGGGCGCTGCACCGGACTCGCGCAAGGCGCTTGGCAGAGACCAAGGCACAGAGCTGTGCCCTCGAGCGACGCGGCGAGGAACTGAGCCGGCACCTCCAAGGTTTGGCTTGGACCCGGGACGGGAAATCACGCATATTCAGCCTGGAGCGGGAGCTTCGAGAACTCCGGGCAGAGGCCGGGCGAACGCGGGGTGCTCTAGAGGAGTTAGGGGCGCACGTTCAGCAGCTACAGGCCAACCCCGGGACCCGGCTGAACGCCTTAAGAGAGGCAGAACTCTGTGGTCCAGTGCTACAGGCAAACCCAGGGACTCTGGCTGCGGAGATCGGGGCCCTGCGTGAGGCCTACATTCGAGGCGGGGGCCGGGACACCGGCGTTCTGGGCTGGATATGGCAGTTACAAGTGGAGGCGTCAGCTCTGGAGCTTCGGCGGTCGCGGACCCGCAGGGGAAGACAGGCAGGTGCCGCATTCAAGGAGCTTCTAGCAGTGGAGGCTGAAAATCGGCGCCTGGAGGCAGAAATCCTGGCTTTGCAGACGCAGAGGGGTGCAGGCCGGGTGCCCTGGGGGCACGGGGAGCCGAGACTTGTGGTCAATCCCAGCCCACGCCTGAGAAGGAGGGAAGATCCCCCAAGGCTCCCGCCTCCAGTGGCTCCCCCGCTGCCGCCGCTTCCACACTCCACAGGCATCCTATTCTTGGGTGGCGCCGAAAAGGCTTCGCAGCTTTCTGGAACCATGACCAGGAACCTGGGCCTGGATCCACACTTCCTCCTGCCCACAACTGACGTTCTGGGCCCTGCACCCTACGACCCTGGGGCTGGCCTTGTCATTTTCTATGACTTCCTGCGGGGCCTTGAGGCTTCTTGGATTTGGGTGCAACTAATGACTGGCTTGGCCCGAGATGGACAGGATACAGGAGGGACCACAGCGTTGCCCCCAGCCCTTTGCTTGCCCCCACCTCCAGCTCCTGGGCCCATGGGCAACTGTGCCATCCTTGCCAGCAGGCAGCCTATACCCAGACTACCACCCTCACCATCAGTATCCTTGGTCTGTGAGCTGCAGGCCTGGCAGGGGCTGGCATGGGCTAAGGCACCACAGGCAAAAGCCTGGGCCTCACTGGTGTTATTTGACCGGGATCAGAGGGTGCTAAGTGGTCGTTGGCGTCTCCCACTTCGGACCCTTCCTCTGGACCCCAGCCTTAGCCTTGGGCAGCTGAATGGGATTCCCCAGGTAGGTCAGGCCGAGCTCTTTCTGCGGCTGGTGAATGCAAGAGATGCAGATGTCCAGACACTGGCAGAGATCAATCCAGCAAGTGCCCACGAGTACCACATCTTACCGCCCACTTCTTTATCCAAATCCAAGCTTCTTCAGGACATCGTCCAGGAAGCCTTCCAGGTTCTCAAGCTCACCATGAAACAGGGAGCTCCTGTAGCCGACAGGATTATGGCCCCAGTTGGAGACAAGGTAGCAGCTCCTTCAGCTCCTCAATTTCTTTCTCATATTCAATTTGCTGAACTGTGCCACTGCTTCATCATACTGAGAGTTGTACCCATAGGCCAAGCCCAGCTGGTAGTGGGTCTCTGCAAGGAGCCGATCATGGGCTTCCAGGGATATAGAGAGCCCAAGAGATGGCAGGAAATGGAGGTTTTAAGAGAAAACCTCTTT

Related Sequences

bmy_07224T0 Protein

Length: 713 aa      View alignments
>bmy_07224T0
MASHSREPGLLPCGSCDMVFRSWALLATHTQRFCIGRQPRELTVGEQPPIATEPRVPRRIPHPTPCTQVVPQEHQGLPDQEASKSALKRLTDEITRGSDYRNIEIAGYCYLQVQRLRLYLQEMRPSITEVPSGSQGPWRRSEAPTQGPNYEAAGSPGERLRALHRTRARRLAETKAQSCALERRGEELSRHLQGLAWTRDGKSRIFSLERELRELRAEAGRTRGALEELGAHVQQLQANPGTRLNALREAELCGPVLQANPGTLAAEIGALREAYIRGGGRDTGVLGWIWQLQVEASALELRRSRTRRGRQAGAAFKELLAVEAENRRLEAEILALQTQRGAGRVPWGHGEPRLVVNPSPRLRRREDPPRLPPPVAPPLPPLPHSTGILFLGGAEKASQLSGTMTRNLGLDPHFLLPTTDVLGPAPYDPGAGLVIFYDFLRGLEASWIWVQLMTGLARDGQDTGGTTALPPALCLPPPPAPGPMGNCAILASRQPIPRLPPSPSVSLVCELQAWQGLAWAKAPQAKAWASLVLFDRDQRVLSGRWRLPLRTLPLDPSLSLGQLNGIPQVGQAELFLRLVNARDADVQTLAEINPASAHEYHILPPTSLSKSKLLQDIVQEAFQVLKLTMKQGAPVADRIMAPVGDKVAAPSAPQFLSHIQFAELCHCFIILRVVPIGQAQLVVGLCKEPIMGFQGYREPKRWQEMEVLRENLF