Part of scaffold_298 (Scaffold)

For more information consult the page for scaffold_298 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TIA1 ENSTTRG00000001195 (Bottlenosed dolphin)

Gene Details

TIA1 cytotoxic granule-associated RNA binding protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001119, Bottlenosed dolphin)

Protein Percentage 93.37%
cDNA percentage 95.97%
Ka/Ks Ratio 0.56329 (Ka = 0.0362, Ks = 0.0643)

TIA1 ENSBTAG00000019182 (Cow)

Gene Details

nucleolysin TIA-1 isoform p40

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025528, Cow)

Protein Percentage 92.75%
cDNA percentage 94.01%
Ka/Ks Ratio 0.27872 (Ka = 0.0409, Ks = 0.1468)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1044 bp    Location:234242..230600   Strand:-
>bmy_07285
ATGATTATGGATACAGCTGGAAATGATCCATATTGTTTTGCAGAGTTTTATGAGCGTCGTCATGCAGCTGCAGCACTAGCTGCTATGAATGGGCGGAAGATAATGGGTAAGGAAGTCAAAGTGAAGTGGGCAACAACCCACAGCAGTCAAAAGAAGGATACAAGCAGTAATACCGTTGTCAGCACACAGCGTTCACAAGGTCACTTCCATGTCTTTGCTGGTGATCTCAGTCCAGAAATTACAACTGAAGATACAAAAGCTGCTTTTGCACCATCTGGAAGAATATCAGATGCCCGAGTGGTAAAAGACATGGCAACAGGAAAGTCTAAGGGATATGGCTTTGTCTCCTTTTTCAACAGATGGGATGCTGAAAACTCCATTCAACAGATGGGTGGCCAGTGGCTTGGTGGAAGACAAATCAGAACTAACTGGGCAACCCGAAAGCCTCCACTTCCAAAGAGTACATATGAGTCAAACACCAAACAGCTATCATATGATGAGGTCGTAAATCAGTCTAGTCCAAGCAACTGTACTGTATATGGTGGAGGTGTCACTTCTGGGCTAACAGAACAACTAATGCGTCAGAGTTTTTCGCCATTTGGACAAATAATGGAAATTCGAGTCTTTCCAGATAAAGGATATTCTTTTGTTCGGTTCAATTCCCATGAAAGTGCAGCACATGCAATTGTTTCTGTTAATGGAACTACCATTGAAGGCCATGTTGTGAAATGCTACTGGGGCAAAGAAACTCTTGATATGATAAATCCCATGCAACAGCAGAATCAAATTGGATATCCACAAGCTTACGGCCAGTGGGGCCAGTGGTATGGGAATGCACAACAAATTGGCCAATATATGCCTAATGGTTGGCAAGTACCTGCATATGGAATGTATGGCCAGCTATGGAACCAGCAGGGATTTAAACAGTCTTCTGCACCATGGATGGGACCAAATTATGGAGTGCAGCCGCCTCCAGGACAGAATGGCAGCATGATGCCTATCAGCCTGCAGGGTATCAGAGTTGCAGGGTATGAAACCCAGTGA

Related Sequences

bmy_07285T0 Protein

Length: 348 aa      View alignments
>bmy_07285T0
MIMDTAGNDPYCFAEFYERRHAAAALAAMNGRKIMGKEVKVKWATTHSSQKKDTSSNTVVSTQRSQGHFHVFAGDLSPEITTEDTKAAFAPSGRISDARVVKDMATGKSKGYGFVSFFNRWDAENSIQQMGGQWLGGRQIRTNWATRKPPLPKSTYESNTKQLSYDEVVNQSSPSNCTVYGGGVTSGLTEQLMRQSFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPMQQQNQIGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQLWNQQGFKQSSAPWMGPNYGVQPPPGQNGSMMPISLQGIRVAGYETQ*