Part of scaffold_299 (Scaffold)

For more information consult the page for scaffold_299 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLDN16 ENSTTRG00000011535 (Bottlenosed dolphin)

Gene Details

claudin 16

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010940, Bottlenosed dolphin)

Protein Percentage 88.83%
cDNA percentage 91.71%
Ka/Ks Ratio 0.90498 (Ka = 0.0273, Ks = 0.0301)

CLDN16 ENSBTAG00000006494 (Cow)

Gene Details

Claudin-16

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008509, Cow)

Protein Percentage 92.89%
cDNA percentage 92.55%
Ka/Ks Ratio 0.19044 (Ka = 0.0393, Ks = 0.2064)

CLDN16  (Minke Whale)

Gene Details

claudin 16

External Links

Gene match (Identifier: BACU016517, Minke Whale)

Protein Percentage 98.48%
cDNA percentage 99.15%
Ka/Ks Ratio 1.36639 (Ka = 0.0093, Ks = 0.0068)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 615 bp    Location:769905..777435   Strand:+
>bmy_07304
GTGAGCACAAAATGCCGAGGCCTCTGGTGGGAGTGTGTCACAAATGCTTTTGATGGGATTCGCACCTGTGATGAGTACGATTCTATATTTGCTGAACACTCCTGTACGTATGCCTTAGACATCACCCTTCTGGTGGTAACTCGGGCACTGATGATTACTGCAGATATTTTAGCTGGATTTGGATTTATTACCCTGCTCCTTGGTCTTGACTGTGTGAAATTGCTCCCTGATGAGCCATACATCAAAGTCCGCATCTGCTTTGTTGCTGGAACCACATTACTTATAGCAGGTGCCCCGGGAATCATTGGCTCTGTGTGGTACGCTGTTGATGTTTATGTGGAACGTTCTTCTCTGGTTTTGCACAATATATTTATTGGCATCCAATATAAATTTGGTTGGTCCTGCTGGCTTGGAATGGCTGGGTCTCTGGGTTGCTTCTTGGCTGGTGCTGTCCTCACATGCTGCTTATACATCTTCAAAGATGTTGGACCTGAGAGGAACTATCCTTATTCCAGGAGGAAAGCCTATTCAACTACAGCTGTTTCCATGGCCCCGTCATACGCAGCCCCTCGGACACAGACTGCCAAAATGTATGCTGTAGACACTAGGGTGTGA

Related Sequences

bmy_07304T0 Protein

Length: 205 aa      View alignments
>bmy_07304T0
VSTKCRGLWWECVTNAFDGIRTCDEYDSIFAEHSCTYALDITLLVVTRALMITADILAGFGFITLLLGLDCVKLLPDEPYIKVRICFVAGTTLLIAGAPGIIGSVWYAVDVYVERSSLVLHNIFIGIQYKFGWSCWLGMAGSLGCFLAGAVLTCCLYIFKDVGPERNYPYSRRKAYSTTAVSMAPSYAAPRTQTAKMYAVDTRV*