Sequence details bmy_07326 (Coding sequence)

Part of scaffold_296 (Scaffold)

For more information consult the page for scaffold_296 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYNPO2 ENSTTRG00000015181 (Bottlenosed dolphin)

Gene Details

synaptopodin 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014391, Bottlenosed dolphin)

Protein Percentage 94.02%
cDNA percentage 96.23%
Ka/Ks Ratio 0.80523 (Ka = 0.0359, Ks = 0.0446)

SYNPO2 ENSBTAG00000006434 (Cow)

Gene Details

synaptopodin-2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008434, Cow)

Protein Percentage 89.44%
cDNA percentage 91.09%
Ka/Ks Ratio 0.30653 (Ka = 0.0596, Ks = 0.1944)

SYNPO2  (Minke Whale)

Gene Details

synaptopodin 2

External Links

Gene match (Identifier: BACU004223, Minke Whale)

Protein Percentage 96.26%
cDNA percentage 97.57%
Ka/Ks Ratio 1.01368 (Ka = 0.0242, Ks = 0.0239)

Additional orthologs identified in other species via the OPTIC pipeline.

SYNPO2 (Human)   Synpo2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3213 bp    Location:1162712..1146851   Strand:-
Raw sequence 
>bmy_07326
ATGTTATATAATTCTAACTATTGCCTCCTTTTTCACTCCACTCAGATCCGAAGCCAGAGCAAAGCCTCCGGGTCTGGGCTCTGTGAGGGGGATGAAGTGGTTTCTATCAATGGCAACCCTTGTGCAGACCTCACCTACCCAGAAGTCATCAAGCTCATGGAGAGCATAACAGACTCTCTCCAAATGCTCGTCAAAAGACCATCCAGTGGAATAAGTGAGACTTTGAACTCTGAAACTGAAAACAAAAACCATGAGCATCTCATCCATGAAGGGTACGTGGRAAGTACCACCCTACAGATTCGACCAGCCACAAAGAGCCAGTACAGAGAGTTCTACATCGCCCAGGTCAAGAGTGGAGCTCCCCTAGCTGAGGACCAAGCAAGTGGTGCTGGTTTTTCTGGGAGCATAAAAGAAGAAACAGGCCTGGCTCCTCACACGTCTGACTCTAAAAGTGGATGCTTACCAGAGGAGGTTATCTTAAGGGAGAAGGCAGAAGCGGGGCAGCCAGGCACTGTGGTTGAGCTACAACTGACCCTTTCACAAGAGAGACACAAGCGCACTACTGCCCCTGTAGTGGCTCTCCTGGGAGCTGAAAAATCTAAGTCTCCTGACCCAGATCCTAATCTACAGCATGACGGGATCATCCACATAAATTCTGTCCCCACTAATGAGAAAGGGGAGCCTTCTCTGAGGTCCAGCAAGATAATCCAGATCTCCAGTGGCCAAGAGTTGAAAGTGATACAGGGAAGTGAAGCAGGAGACACCGGGCTGCCCCGAGTGGAAGTGATCTTCGACTGCTCTGATAGGCAGAAGACGGAAGGGAGCAGGCTTCAGGCAGGAAAGGGGTGTGTGGATTCTCCAGTGGAAGGAGGGCAGTTAGAAGCACCTCCTTCTCTGGTATCCTTTGCAGTCTCATCAGAAGGCACAGAGCACGGAGAAGATCCACGCTCAGAAAGGGATCACAGCAGACCTCACAAGCACAGAGCACGCCACGCACGGCTCAGGAGGAGTGAAAGCCTATCAGAAAAGCAGGTGAAAGAAGCAAAATCTAAATGCAAAAGCATTGCCCTCCTTCTGACAGATGCTCCCAACCCCAACTCCAAGGGGGTGTTGATGTTTAAGAAGCGTCGTCGGAGGGCCAGGAAATACACCCTAGTCAGTTACGGGACTGGTGAACTTGATCGAGAGGCAGACGAGGAGGAGGAAGAAGGCGACAAAGAGGATACATGTGAAGTAGCATTTCTGGGTGCGAGCGAATCCGAGGTGGAGGAAGAGTTGTTGTCTGACACTGACGACAACACACAAGTTGTGAACTTTGACTGGGATTCTGGACTAGTGGACATTGAAAAGAAACTGAACAGAGGGGACAAGATGGAGATGTTGCCAGAYACCACAGGCAAGGGGGCCCTCATGTTTGCTAAGAGGAGGGAGAGAATGGATCAGATCACAGCCCAAAAAGAGGAGGAGAGGGTGAGTGGAATGCCAAGCAGAGAACCAGATGCTGCCCAGACGGATGGCCTGAGAACCATGACATCTTACCAAAGGAAGGAAGAAGAATCGGTGAGAGTGCAGAGCTCTGTGAGCAAAAGCTACATCGAGGTGAGCCATGGCCTTGGCCATGTGCCCCAACAGAATGGCTTCACTGGGGTGTCCGAGACAGCAGAGGCTCAGAGGATGATCCCTATGAATAGAACGGCCAGACCCTTCCCGGGGTCTGTGAACCAGCCAGCAACCCCCTTCTCTCCAACGCGAAACATGACCAGTCCCATCGCTGACTTTCCTGCGCCTCCACCTTACTCTGCAGTCACACCCCCACCTGAAACCTTCTCCAGAGCAGTGTCAAGTCCGACAGCTGGCCCACCACAGCCCCCTCCGTGGCCCCAGCCTGGCCCATGGTCCCAGCCAGCCTTTTACGATTCATCTGAGCGAATAGCTTCCCGGGATGAAAGGATCGCGGTGCCAGCAAAAAGAACAGGAATATTGCAGGAGGCCAAAAGGAGAAGCACGACAAAACCCATGTTCACTTTTAAAGAGCCCAAAGTAAGCCCAAATCCTGAACTCTTGTCACTTCTTCAAAATTCGGAAGGCAAAAAGGGCACTGGAGCAGGAGGAGATTCCGGACCAGAAGAAGACTACCTCAGTTTAGGAGCAGAGGCTTGTAATTTCATGCAAAGCCCCACTGCAAAACAAAAGACCCCACCTCCTGTCGCTCCAAAGCCTTCTGTCAAGTCCTCATCCTCCCAACCAGTAACTCCAGTTTCTCCAGTCTGGTCGCCAGGAGTGGCTCCAGCCCAACCTCCTGCCTTCCCCACATCCAACCCATCACATGGCACCGTTGTTTCCTCCATCAAAATAGCGCAGCCTTCTTACCCTCCTGCCCGGCCTGCTAGTGCTCTGAACCTGGCTGGTCCCTTCAAAGGACCACAAGCATCGGYAGCCAGTCTGAACTACACTCCCAAACCAGCGGCTCCCACACCAACGGTAAACGCTGCTCATCCTGGTGCAATGGGACCATCCAGTGAGCTTCCAGGAATGAGTGGGAAAGGAGCCCAGCTCTTTGCTAAAAGGCAGTCGAGGATGAAAAAGTACGTGGTAGATTCAGACACCGTGCAGGCCCATGCTGCCCGTGCTCAGTCTCCCACTCCATCTCTCCCGGCCGGCTGGAAGTACTCCTCCAATGTCCGAGCACCCCCTCCTGTGGCCTACAATCCTATCCACTCCCCCTCCTACCCACTGGCTGCCGTCAAGTCCCAGCCATCAGCCCCACAGGCCTCCAAAACAAGCAAGAAAAAGGGCAAGAAACCCCTTAATGCTTTGGATGTCATGAAGCACCAACCTTATCAGCTAAATGCATCCTTGTTTACTTTCCAACCTCCAGATGCAAAGGATGGCCTCCCTGCAAAGTCATCAGTCAAGGTCAGTTCACTGCCAGCCATGAAGCAAGCTATTCCTCCTCAGCCAGTGAATGCTGGCTCGCCCGCTAATGTGCAGGCCTCGTCTGTGTACTCAGTGCCAGCCTATAGCTCTCAGCCTTCCTTCTTTGCCGAGGCCACCTCACCAGTAAGCGCCTCCCCAGTGCCCGTGGCCATTCCCACCTCTCCAAAGCAAGAATCAGCCTCTACATCTTACTTTGTGGCACCAAGGCCGAAGTTCTCAGCAAAGAAAAGTGGTGTCACAGTTCAGGTGTGGAAACCATCTGTAGCGGAAGAGTAA

Related Sequences

bmy_07326T0 Protein

Length: 1071 aa      View alignments
>bmy_07326T0
MLYNSNYCLLFHSTQIRSQSKASGSGLCEGDEVVSINGNPCADLTYPEVIKLMESITDSLQMLVKRPSSGISETLNSETENKNHEHLIHEGYVXSTTLQIRPATKSQYREFYIAQVKSGAPLAEDQASGAGFSGSIKEETGLAPHTSDSKSGCLPEEVILREKAEAGQPGTVVELQLTLSQERHKRTTAPVVALLGAEKSKSPDPDPNLQHDGIIHINSVPTNEKGEPSLRSSKIIQISSGQELKVIQGSEAGDTGLPRVEVIFDCSDRQKTEGSRLQAGKGCVDSPVEGGQLEAPPSLVSFAVSSEGTEHGEDPRSERDHSRPHKHRARHARLRRSESLSEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELDREADEEEEEGDKEDTCEVAFLGASESEVEEELLSDTDDNTQVVNFDWDSGLVDIEKKLNRGDKMEMLPDTTGKGALMFAKRRERMDQITAQKEEERVSGMPSREPDAAQTDGLRTMTSYQRKEEESVRVQSSVSKSYIEVSHGLGHVPQQNGFTGVSETAEAQRMIPMNRTARPFPGSVNQPATPFSPTRNMTSPIADFPAPPPYSAVTPPPETFSRAVSSPTAGPPQPPPWPQPGPWSQPAFYDSSERIASRDERIAVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGKKGTGAGGDSGPEEDYLSLGAEACNFMQSPTAKQKTPPPVAPKPSVKSSSSQPVTPVSPVWSPGVAPAQPPAFPTSNPSHGTVVSSIKIAQPSYPPARPASALNLAGPFKGPQASXASLNYTPKPAAPTPTVNAAHPGAMGPSSELPGMSGKGAQLFAKRQSRMKKYVVDSDTVQAHAARAQSPTPSLPAGWKYSSNVRAPPPVAYNPIHSPSYPLAAVKSQPSAPQASKTSKKKGKKPLNALDVMKHQPYQLNASLFTFQPPDAKDGLPAKSSVKVSSLPAMKQAIPPQPVNAGSPANVQASSVYSVPAYSSQPSFFAEATSPVSASPVPVAIPTSPKQESASTSYFVAPRPKFSAKKSGVTVQVWKPSVAEE*