Part of scaffold_302 (Scaffold)

For more information consult the page for scaffold_302 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HOXD12 ENSTTRG00000013772 (Bottlenosed dolphin)

Gene Details

homeobox D12

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013063, Bottlenosed dolphin)

Protein Percentage 96.04%
cDNA percentage 96.88%
Ka/Ks Ratio 0.25368 (Ka = 0.0202, Ks = 0.0794)

HOXD12 ENSBTAG00000004314 (Cow)

Gene Details

homeobox protein Hox-D12

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005652, Cow)

Protein Percentage 94.8%
cDNA percentage 94.42%
Ka/Ks Ratio 0.13192 (Ka = 0.0252, Ks = 0.1909)

HOXD12  (Minke Whale)

Gene Details

homeobox D12

External Links

Gene match (Identifier: BACU014088, Minke Whale)

Protein Percentage 99.63%
cDNA percentage 99.38%
Ka/Ks Ratio 0.07054 (Ka = 0.0016, Ks = 0.0229)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 963 bp    Location:149226..148264   Strand:-
>bmy_07335
ATGTGTGAGCGCAGTCTCTACAGAGCGGGCTATGTGGGCTCGCTTCTGAATCTACAGTCGCCCGACTCCTTCTACTTTTCCAACCTGCGGCCAAATGGCGGCCAGTTGGCCGCGCTTCCCTCCATCTCATACCCGCGCGGCGCGCTGCCCTGGGCCACCACGCCCGCCTCCTGCGCCCCAGCGCAGCCTGCCGGTGCCACCAACTTCGGTAGCTTTTCCCAGCCCTACCTGGCTGGCTCTGGGCCTCTTGGCCTGCAGCCCCTGGGCGCCAAGGACGGATCCGAAGAACAGGCCAAGTTTTATACTCCCGACGCGGCCGCCGGGCCGGAGGAGCGTGGCCGTGCGCGGCCTCCCTTCATCCCGGAGTCTAGCCTGGCCCCCGCGGCCGCTGCTCTCAAAGCGGCCAAGTACGACTACGCGGGTGTGGGCCGCGTCGCGCCGGGCTCTTCGGCCCTTCTCGAGGGGACACCCTGCTCCTCCGGCTTCAAGGACGAGACCAAGGGCCCGCTCAACTTGAACATGACAGTGCAGGCGGCGGGCGTCGCTTCCTGCCTGCAACCTTCGCTGCCCGACGGTAAAGGGTGGCCACGCTCCGCGAGCGACGCACCCCGGGCCGGGGTGGGAGGTGGGGTGCAGGGGAGAGTGTGTAGAGGGAGGGAGCCGCCAGGGGCGGGCAGGCAACCGGGAGCGGGCCGGGCTGACTGGGGTTGGGGCTGTGTTGCAGGCCTGCCGTGGGGGGCGGCCCCGGGGAGGGCCCGCAAGAAGCGGAAACCCTACACTAAGCAGCAGATTGCGGAGCTGGAGAACGAATTCCTTCTCAACGAATTCATCAACCGGCAGAAGCGCAAGGAATTGTCCAACAGGCTGAACCTCAGCGACCAGCAAGTCAAAATCTGGTTCCAGAACCGGCGTATGAAGAAGAAGCGCGTGGTGCTGCGTGAGCAGGCGCTGGCGCTATACTAG

Related Sequences

bmy_07335T0 Protein

Length: 321 aa      View alignments
>bmy_07335T0
MCERSLYRAGYVGSLLNLQSPDSFYFSNLRPNGGQLAALPSISYPRGALPWATTPASCAPAQPAGATNFGSFSQPYLAGSGPLGLQPLGAKDGSEEQAKFYTPDAAAGPEERGRARPPFIPESSLAPAAAALKAAKYDYAGVGRVAPGSSALLEGTPCSSGFKDETKGPLNLNMTVQAAGVASCLQPSLPDGKGWPRSASDAPRAGVGGGVQGRVCRGREPPGAGRQPGAGRADWGWGCVAGLPWGAAPGRARKKRKPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVVLREQALALY*