Part of scaffold_301 (Scaffold)

For more information consult the page for scaffold_301 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TLR6 ENSTTRG00000004042 (Bottlenosed dolphin)

Gene Details

toll-like receptor 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003797, Bottlenosed dolphin)

Protein Percentage 89.96%
cDNA percentage 92.47%
Ka/Ks Ratio 1.01942 (Ka = 0.0167, Ks = 0.0164)

BT.45021 ENSBTAG00000014031 (Cow)

Gene Details

toll-like receptor 6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000035880, Cow)

Protein Percentage 87.01%
cDNA percentage 90.84%
Ka/Ks Ratio 0.43133 (Ka = 0.0686, Ks = 0.159)

TLR6  (Minke Whale)

Gene Details

toll-like receptor 6

External Links

Gene match (Identifier: BACU007645, Minke Whale)

Protein Percentage 97.24%
cDNA percentage 98.54%
Ka/Ks Ratio 0.49086 (Ka = 0.0058, Ks = 0.0119)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2550 bp    Location:661927..689830   Strand:+
>bmy_07385
ATGTCTGCCAGGACTCGCATTTTGTCAAGCACTTATTTTTCCGTGCGTTTAGAAGTTACTTTCTCTTCTTCTGAGAAAGAAATCTTGAATTTGGATTCATATCAAGATGTTCTGAAGAACAGCAACAACCCTCTAGGGGATAGCCACTTCAACATCATGACCAAAGACAAAGAATCTGCTGTCAGAAACCTTCATTTTGTTTACATCCTGACCTTAGTATTTGGAACCATAATCCAGTTCTCTGATGAAAGTGAATTTGTGGTGGACATGTCAAAAATAGGCCTTATTCGTGTTCCCAAAGACCTGTCACCAAAAACCGAAGTCTTAGATATGTCTCAAAACTACATATCTGAGCTTCACCTCTCTGACATCGGCTTTCTCTCAGGGCTGAAAGTTTTGAGACTTTCCCATAATAGAATCCAGTGCCTTGATATTAGTATTTTCAAGTTCAACCAGGATTTGGAATATTTGGATTTATCTCACAATCGGTTGCAGAAGATATCCTGTCATCCGATCACTACAAGTCTCAAGCATTTAGACCTCTCATTCAATGACTTTGATGCCCTGCCCATCTGTAAGGAATTTGGCAGCTTGACTCAACTGAATTTCTTAGGATTAAGTGCTACAAAGTTACAGCAATTAGATCTACTACCAATTGCTCACTTGCACCTAAGTTGCATCCTTCTGGATTTGGAAGGTTATTTTGTGAAAGAAAATGAGAACGAAAGTCTTCAAATTCTGAATACAAAGGAACTTCACCTTGTTTTTCACCCAAATAGCTTCTTCTCTGTCCAAGTTAACATATCAGTGAATAGTTTAGGGTGGTTACAACTGACTAATATTAAATTGAATGATGACAACTGTCAAGTTTTAATTAAATTTTTATCAGAACTCACTAGAGRGCCAACCTTACTGAATTTTACCCTAAACCATATGGAAACAACTTGGAAATGTTTGGTTGGAGTTTTTCAATTCCTTTGGCCCAAACCTGTAGAATATCTCAATATTTACAATTTAACACTAGTTGAAAGCATCAATGAAGAAGTTTTTACTTATCATGAAACAACATTGAAAGCACTGACTATAGAACATGTTATAAACAGAGTTTTTATTTTTTCACAGACAGCATTATACACAGTGTTTTCTGAGATGACTATTACGATGTTAACCATATCAGACACACCTTTTGTACACATGCTTTGTCCTCAGAAACCAAGCACATTTACGTTTTTGAACTTCACCCAGAATATTTTCACAGATAGTGTTTTTCAAAATTGCCACACTTTAGCTAGATTGGAGACACTTAYTCTACAAAAGAATGAATTAAAAGACCTTTTCARAGTAGGTCTCATGACTAAGGATATGCTGTCTTTGGAAATACTGGATGTTAGCTGGAATTCTTTGGAATATGATAGACATGATGGAAATTGCACTTGGGTTGGGAGTATAGTGGTGTTAAATTTATCTTCAAATATACTTACTGACTCTGTTTTCAGATGTTTACCTCCCAGGGTCAAGGTTCTTGATCTCCACAATAACAGAATAAGGAGCATCCCTATAGATGTCACCAGTCTAGAAACTTTGCAAGAACTCAATGTTGCTTCCAATTCTTTAGCCCACCTTCCTGGATGTGGTACCTTTAGCAGCCTTTCCATACTGATCATTGACTATAATTCAGTCTCCAACCCATCAGCTGATTTCTTCCAGAGCTGCCAGAAGATTAGGTCCCTAAAAGCAGGGAACAATCCATTCCAATGTACATGTGAGTTAAGAGACTTTATCCAAAGTGTAGGCCAAATATCAAGTGAAGTGGTAGAGGGTTGGCCTGATTCTTATAAGTGTGATTATCCAGAAAGCTATAAGGGAACCCCATTAAAGGACTTCCATGTATCTCAATTATCCTGCAACACAGCTCTGCTGATTGTCACCATTGGGGTCCCTGGGCTGGTGTTGGCTGTTACTGTGACTGTCCTCTGTATCTACTTGGATCTGCCCTGGTATCTCAGGATGGTGTGKCAGTGGACCCAGACCCGGCRCAGGGCTAGGAATGTACCCTTAGAAGAACTCCAAAGARCTSTCCAGTTCCATGCTTTTATTTCATAYAGTGRRCATGATTCTGCCTGGGTGAAGAATGAAYTWRTACCWWRYCTAGAAAAAGAAGATATAAGAATTTGTCTCCATGAGAGAAACTTTGTTCCTGGCAAGAGCATCRTGGAAAATATCATAAACTGCATTGAGAAAAGTTACAAGTCCATCTTTGTTTTGTCTCCCAACTTTGTCCAGAGTGAGTGGTGCCATTATGAACTCTACTTTGCCCACCACAATCTTTTCCATGAAGGATCTAATAACTTAATCCTGATCTTGCTGGAACCCATTCCACAGAACAGCATTCCTGGCAAGTATCACAAGCTGAGGGCTCTCATGGCACAGAGAACTTATTTGGAATGGCCCAAGGAGAAGAGCAAACATGGACTTTTTTGGGCTAATATTAGAGCTGCTTTTAATATTAAATTAACACTAGTCACTGAAAATGATGATGTGAAAGCTTGA

Related Sequences

bmy_07385T0 Protein

Length: 850 aa      View alignments
>bmy_07385T0
MSARTRILSSTYFSVRLEVTFSSSEKEILNLDSYQDVLKNSNNPLGDSHFNIMTKDKESAVRNLHFVYILTLVFGTIIQFSDESEFVVDMSKIGLIRVPKDLSPKTEVLDMSQNYISELHLSDIGFLSGLKVLRLSHNRIQCLDISIFKFNQDLEYLDLSHNRLQKISCHPITTSLKHLDLSFNDFDALPICKEFGSLTQLNFLGLSATKLQQLDLLPIAHLHLSCILLDLEGYFVKENENESLQILNTKELHLVFHPNSFFSVQVNISVNSLGWLQLTNIKLNDDNCQVLIKFLSELTRXPTLLNFTLNHMETTWKCLVGVFQFLWPKPVEYLNIYNLTLVESINEEVFTYHETTLKALTIEHVINRVFIFSQTALYTVFSEMTITMLTISDTPFVHMLCPQKPSTFTFLNFTQNIFTDSVFQNCHTLARLETLXLQKNELKDLFXVGLMTKDMLSLEILDVSWNSLEYDRHDGNCTWVGSIVVLNLSSNILTDSVFRCLPPRVKVLDLHNNRIRSIPIDVTSLETLQELNVASNSLAHLPGCGTFSSLSILIIDYNSVSNPSADFFQSCQKIRSLKAGNNPFQCTCELRDFIQSVGQISSEVVEGWPDSYKCDYPESYKGTPLKDFHVSQLSCNTALLIVTIGVPGLVLAVTVTVLCIYLDLPWYLRMVXQWTQTRXRARNVPLEELQRXXQFHAFISYSXHDSAWVKNEXXPXLEKEDIRICLHERNFVPGKSIXENIINCIEKSYKSIFVLSPNFVQSEWCHYELYFAHHNLFHEGSNNLILILLEPIPQNSIPGKYHKLRALMAQRTYLEWPKEKSKHGLFWANIRAAFNIKLTLVTENDDVKA*