Part of scaffold_308 (Scaffold)

For more information consult the page for scaffold_308 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RD3 ENSTTRG00000015930 (Bottlenosed dolphin)

Gene Details

retinal degeneration 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015096, Bottlenosed dolphin)

Protein Percentage 94.27%
cDNA percentage 95.31%
Ka/Ks Ratio 0.10709 (Ka = 0.0233, Ks = 0.2178)

RD3 ENSBTAG00000024453 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000033826, Cow)

Protein Percentage 87.63%
cDNA percentage 90.21%
Ka/Ks Ratio 0.06342 (Ka = 0.0501, Ks = 0.7901)

RD3  (Minke Whale)

Gene Details

retinal degeneration 3

External Links

Gene match (Identifier: BACU000023, Minke Whale)

Protein Percentage 98.84%
cDNA percentage 99.22%
Ka/Ks Ratio 0.12431 (Ka = 0.0044, Ks = 0.0355)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 588 bp    Location:1173227..1175970   Strand:+
>bmy_07408
ATGTCCCTCATCCCATGGCTCCGGTGGAACGAGGCCCCGCCACGGCTGTCGTCTCGGAGCCCGGCTGAGATGGTGCTGGAGACGCTCATGGTGGAGCTGGAGGGGCAGATGCGAGAGGCTGAGAGGCAGCAGTGTGAGCGCAGCAACGCCGTCCGGAAGGTCTGCACCGGAGTAGACTACAGCTGGCTGGCCAGCGCGCCCCGGCCCACCTACGACCTCAGCCCCGGGGAGAGGCTGCAACTAGAGGACGTCTGTGCCAAGATCCACCCATCCTACTGTGGGCCCGCCATCCTCAGGTTCCGGCAGCTGATGGCAGAGCAGGAGCCCGAGGTGCAGGAGGTGTCCCGGCTCTTCCGCTCGGTGCTGCAGGAAGTCCTGGAGAGGATGAAGCAGGAGGAGGAGGCGCACAAGCTGACCCGGCAGTGGAGCCTGCGGCCCCGCGGCAGCCTGGCCACCTTCAGGAGCCGCGCGCGCATCACCCCCTTCGCCAGCGACATCCGCACCATCTCCCAGGACGTGGAGCGGGACGCGCCGCCGCCGCCCCGGACCTGGAGCATGCCCGAGTTCCGGGCCCAAAAAGAGGACTGA

Related Sequences

bmy_07408T0 Protein

Length: 196 aa      View alignments
>bmy_07408T0
MSLIPWLRWNEAPPRLSSRSPAEMVLETLMVELEGQMREAERQQCERSNAVRKVCTGVDYSWLASAPRPTYDLSPGERLQLEDVCAKIHPSYCGPAILRFRQLMAEQEPEVQEVSRLFRSVLQEVLERMKQEEEAHKLTRQWSLRPRGSLATFRSRARITPFASDIRTISQDVERDAPPPPRTWSMPEFRAQKED*