Part of scaffold_308 (Scaffold)

For more information consult the page for scaffold_308 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRAF5 ENSTTRG00000013528 (Bottlenosed dolphin)

Gene Details

TNF receptor-associated factor 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012836, Bottlenosed dolphin)

Protein Percentage 81.0%
cDNA percentage 81.3%
Ka/Ks Ratio 0.45651 (Ka = 0.0104, Ks = 0.0228)

TRAF5  (Minke Whale)

Gene Details

TNF receptor-associated factor 5

External Links

Gene match (Identifier: BACU000022, Minke Whale)

Protein Percentage 99.43%
cDNA percentage 99.05%
Ka/Ks Ratio 0.0985 (Ka = 0.0027, Ks = 0.0273)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1677 bp    Location:1254336..1238347   Strand:-
>bmy_07409
ATGGCTTGTTCTGAGGAGCAAGGAGGTGTCCCCTGTGGCTTCATCCGCCAGAATTCTGGCAACTCCATGTCTTTGGACTTTGAGCCGGACGCAGAGTACCAGTTTGTGGAGCAGCTGGAAGAGCGCTACAGATGTGCCTTCTGCCGCTCAGTGCTTCACAACCCCCACCAGACGGGCTGTGGGCACCGCTTCTGCCAGCACTGCATCCTGTCCCTGAGAGAATTAAACGCAGTCCCACTCTGCCCTGTAGATAAGGAGGTGATCAAATCTCAGGAGGTGTTTAAAGACAATTGCTGCAGAAGAGAAGTCCTCAATTTATATGTATTTTGCAAAAATGCTCCTGGATGTAATGCCAAGATTATTCTGGGACGATACCAGGACCACCTTCAGCACTGCTTATTCCAAGCTGTGCAGTGCTCTAATGAGAATTGTCGGGAGCCAGTCCTTCGCAAAGATCTGAAAGAGCATTTGAGCGCAGACTGTCCGTTTCGAGAGGAAAAATGCCTTTATTGCAAAAAGGATGTGGTAGTCATCAATCTACAGAATCATGAGGAAAACTTGTGTCCTGAGTACCCAGTATCTTGTCCCAACAAGTGTTTGCAGATTATTCCAAGAACTGAGGTGGATGAACACCTTGCTGTGTGTCCTGAAGCTGAACAAGACTGTCCTTTTAAGCACTATGGCTGTACTGTAAAGGATAAACGAGGAAACCTGCAGGAGCATGAGCATTCAGCCTTACGGGACCACATGCTTCTGGTTTTAGAAAAGAACTTCCAGTTAGAAGAACAGATTTCTGACTTATATAAGAGCCTAGAACAAAAAGAAAGTAAAATCCAGCAGCTAGCAGAAACCGTAAAGAAATTCGAAAAGGAGTTCAAGCAGTTTGCACAGTTGTTTGGCAAAAATGGAACTTTCCTTTCAAATATACAGGTTCTTGCCAGTCACATTGACAAGTCCGCTTGGCTAGAAGTTCAGGTGCGTCAGTTATTACAAATGGCTAACCAGCAACAAAGTAAATTTGATCTGAGGCCTTTGGCGGAAGCGATTGATACAGTGAAACAGAAAATCACCCTGCTAGAAACCCATGATCAAAGATTAGTTGTTTTGGAAGGGGAGACTAACAAACATGATGCCCACATTAATATTCATAAAGCACAGCTGAATAAAAACGAAGAGCGATTTAAGTTGTTAGAAAGTGCCTGCTATAACGGAAAGCTCATCTGGAAGGTGACAGACTACAAGCTGAAGAAGAAGGAGGCGCTGGACGGACACACAGTATCCATCTTCAGCCAGCCCTTCTACACCAGCCGGTGTGGCTACAGGCTCTGCGCTAGAGCGTACCTGAATGGGGACGGGTCCGGGAAGGGGACGCACCTGTCGTTGTACTTTGTGGTGATGCGAGGGGAGTTTGACTCACTGTTGCAGTGGCCATTCAGGCAGAGGGTGACCCTGATGCTTTTGGACCAAAGTGGCAAAAAGAACCACATTATGGAGACCTTCAAGGCTGACCCCAATAGCAGCAGCTTTAAAAGACCCGATGGGGAGATGAATATTGCCTCTGGCTGTCCACGCTTCGTGGCTCATTCCACTTTGGAGAATGCCAAGAACACCTACATTAAAGATGACACCCTGTTCTTGAAAGTAGCTGTGGATTTAACTGACCTGGAGGATCTCTAA

Related Sequences

bmy_07409T0 Protein

Length: 559 aa     
>bmy_07409T0
MACSEEQGGVPCGFIRQNSGNSMSLDFEPDAEYQFVEQLEERYRCAFCRSVLHNPHQTGCGHRFCQHCILSLRELNAVPLCPVDKEVIKSQEVFKDNCCRREVLNLYVFCKNAPGCNAKIILGRYQDHLQHCLFQAVQCSNENCREPVLRKDLKEHLSADCPFREEKCLYCKKDVVVINLQNHEENLCPEYPVSCPNKCLQIIPRTEVDEHLAVCPEAEQDCPFKHYGCTVKDKRGNLQEHEHSALRDHMLLVLEKNFQLEEQISDLYKSLEQKESKIQQLAETVKKFEKEFKQFAQLFGKNGTFLSNIQVLASHIDKSAWLEVQVRQLLQMANQQQSKFDLRPLAEAIDTVKQKITLLETHDQRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLESACYNGKLIWKVTDYKLKKKEALDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNHIMETFKADPNSSSFKRPDGEMNIASGCPRFVAHSTLENAKNTYIKDDTLFLKVAVDLTDLEDL*