Part of scaffold_320 (Scaffold)

For more information consult the page for scaffold_320 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HERPUD2 ENSTTRG00000007476 (Bottlenosed dolphin)

Gene Details

HERPUD family member 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007073, Bottlenosed dolphin)

Protein Percentage 91.57%
cDNA percentage 92.85%
Ka/Ks Ratio 0.62384 (Ka = 0.0457, Ks = 0.0733)

HERPUD2 ENSBTAG00000015105 (Cow)

Gene Details

Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020101, Cow)

Protein Percentage 89.27%
cDNA percentage 90.42%
Ka/Ks Ratio 0.31088 (Ka = 0.07, Ks = 0.2253)

HERPUD2  (Minke Whale)

Gene Details

HERPUD family member 2

External Links

Gene match (Identifier: BACU009540, Minke Whale)

Protein Percentage 99.53%
cDNA percentage 99.68%
Ka/Ks Ratio 0.32549 (Ka = 0.0021, Ks = 0.0065)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 786 bp    Location:1113671..1108400   Strand:-
>bmy_07431
ATGAAGAAAAGGAGAGTTACAAAATTCACAAATTCTGCATTTACTTATATGTTTATCCCTGTAGTTGTCTTGAGAAATGTAGACAACCAGCTTCCTGGGCAGGCTGTTCCGGCTGGATTCCCAGTGTATCCCGCTTTCAGCCCACTGCAGATGCTATGGTGGCAACAGATGTATGCGCATCATCAAGCTGCAGTTTCAGCTCAGGCCACATCAAATGCCAACCCAGCCCAGCCTGCTGCTTCACAGCCTCTAAATCTGGCACACGTTCCCGGAGAAGAACCCCCGCCAGCTCCAAACCTAGTGGCCCAAGAAAATCGACCCATGAATGAGAATGTTCAAATGAATGCACAGGGAGGTCCAGTGCTGAACGAAGAAGACTTCAATCGAGACTGGCTAGACTGGATGTACACGTTCTCACGAGCTGCAATTCTCCTTAGCATTGTGTACTTCTATTCTTCTTTTAGTCGGTTTATCATGGTAATGGGAGCCATGCTACTGGTTTATTTACACCAAGCTGGATGGTTTCCTTTTAGGCAAGAAGGAGGTCAGCAACAGGCTCCCAACAATAATGCCGAAGTCAACAATGATGCGCAGAATGCAAACAATCTAGAACTTGAAGAAATGGAGCGTCTTATGGATGATGGGCTTGAAGATGAGAGTGGAGAAGATGCAGGTGAAGATGCCAGTGCAATTCAAAGGCCTGGATTAATGGCATCAGCTTGGTCTTTTATCACCACCTTCTTTACTTCACTAATACCAGAGGGGCCTCCCCAGGTTGCCAATTAG

Related Sequences

bmy_07431T0 Protein

Length: 262 aa      View alignments
>bmy_07431T0
MKKRRVTKFTNSAFTYMFIPVVVLRNVDNQLPGQAVPAGFPVYPAFSPLQMLWWQQMYAHHQAAVSAQATSNANPAQPAASQPLNLAHVPGEEPPPAPNLVAQENRPMNENVQMNAQGGPVLNEEDFNRDWLDWMYTFSRAAILLSIVYFYSSFSRFIMVMGAMLLVYLHQAGWFPFRQEGGQQQAPNNNAEVNNDAQNANNLELEEMERLMDDGLEDESGEDAGEDASAIQRPGLMASAWSFITTFFTSLIPEGPPQVAN*