Part of scaffold_311 (Scaffold)

For more information consult the page for scaffold_311 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RBBP6 ENSTTRG00000002696 (Bottlenosed dolphin)

Gene Details

retinoblastoma binding protein 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002528, Bottlenosed dolphin)

Protein Percentage 97.12%
cDNA percentage 97.18%
Ka/Ks Ratio 0.26035 (Ka = 0.0126, Ks = 0.0484)

RBBP6 ENSBTAG00000009441 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012423, Cow)

Protein Percentage 96.78%
cDNA percentage 96.16%
Ka/Ks Ratio 0.11443 (Ka = 0.0146, Ks = 0.128)

RBBP6  (Minke Whale)

Gene Details

retinoblastoma binding protein 6

External Links

Gene match (Identifier: BACU011871, Minke Whale)

Protein Percentage 99.1%
cDNA percentage 99.01%
Ka/Ks Ratio 0.27779 (Ka = 0.0064, Ks = 0.0231)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5256 bp    Location:829264..797941   Strand:-
>bmy_07481
ATGTCTTGTGTGCATTATAAATTTTCCTCTAAACTCAACTATGATACCGTCACCTTTGATGGGCTCCACATCTCCCTCTGCGACTTAAAGAAGCAGATTATGGGGAGAGAGAAGCTGAAAGCTGCCGACTGCGACCTGCAGATCACCAACGCGCAGACGAAAGAAGAATATACTGATGATAATGCTCTAATTCCTAAGAATTCATCTGTAATTGTTAGAAGAATTCCTATTGGAGGTGTTAAATCTACAAGCAAGACATATGTTATAAGTCGAACTGAACCAGTGATGGGAACTTCAAAAGCAATTGATGACTCTTCTGCGTCTATTTCTCTGGCCCAGCTTACGAAGACTGCCAATCTGGCTGAAGCCAATGCTTCTGAAGAAGATAAAATTAAAGCAATGATGTCGCAATCTGGCCATGAATACGACCCAGTCAATTACATGAAGAAACCTCTAGGTCCACCACCTCCATCTTACACTTGTTTCCGTTGCGGTAAACCTGGCCATTATATTAAGAATTGCCCAACAAATGGGGTGAAAGATCCTAACATGAAAGGTGCAATGCTTACCAACACTGGAAAATATGCAATACCAACTATAGATGCAGAAGCATATGCAATTGGGAAAAAAGAAAAACCACCTTTTTTACCAGAGGAACCATCATCATCTTCAGAAGAAGATGATCCTATCCCAGATGAATTGTTGTGTCTCATCTGCAAAGATATTATGACTGATGCTGTTGTCATTCCGTGCTGTGGAAACAGTTATTGTGATGAATGTATAAGGACTGCTCTCTTGGAATCAGATGAACATACATGTCCAACATGTCATCAGAATGATGTCTCTCCTGATGCTTTAATTGCCAATAAGTTCTTACGACAGGCTGTTAATAACTTCAAAAATGAAACTGGTTATACGAAAAGACTAAGAAAACAGTTACCTCCACCCCCACCCCCAATACCACCTCCAAGACCACTCATTCAGCGGAACCTACAACCTCTGATGAGATCTCCAATATCAAGACAACAAGATCCTCTGATGATTCCAGTGACATCTTCATCAGCTCACCCGGCTCCATCTATATCTTCATTAACCTCTAATCAGTCTTCCTTGGCCCCTCCTGTGCCTGGAAATCCATCTTCTACCCCAGCCCCTGTACCTGATATAACTGCAACAGTCTCCATATCAGTCCACTCAGAAAAATCAGATGGGCCTTTTCGGGATTCTGATAATAAAATACTGCCAGCTGCAGCGCTTGCATCTGAACATTCAAAGGGAGCCTCTTCAATTGCAATTACTGCACTTATGGAAGAGAAGGGTTACCAGGTGCCTGTACTTGGAACCCCATCTTTGCTTGGACAGTCATTATTGCATGGACAATTGATCCCCACAACTGGTCCAGTAAGAATAAACACTGCTCGTCCAGGTGGTGGTCGACCAGGTTGGGAACAAAGTATAAACCGTGGACGACACCACAGCGAAAGATCACAGAGAACTCAAGGCCCATCACTACCAGCAACTCCAGTTTTTGTACCTGTCCCACCCCCTCCCTTGTATCCTCCTCCTCCCCATACGCTTCCTCTCCCTCCAGGTGTTCCTCCTCCACAGTTTTCTCCTCAGTTTCCTCCTGGCCAGCCACCACCTGCTGGGTATAGTGTTCCCCCTCCAGGGTTTCCTCCAGCTCCGGCCAATTTATCAACACCTTGGGTATCATCAGGAGTACAGACAGCTCATTCAAATACCATCCCAACAACACAAGCACCACCTTTGTCCAGGGAAGAATTCTATAGAGAGCAACGACGACTAAAAGAAGAGGAAAAGAAAAAGTCCAAGCTAGATGAGTTTACAAATGATTTTGCTAAGGAATTGATGGAATACAAAAAGATTCAAAAGGAGCGTAGGCGCTCATTTTCCAGGTCCAAATCTCCCTATAGTGGTTCATCCTATTCAAGAAGTTCATATACTTATTCTAAATCAAGATCTGGTTCAACACGATCACGTTCTTATTCTCGATCGTTTAGCCGCTCACATTCTCGTTCCTATTCACGATCACCTCCATACCCCAGAAGAGGCAGAGGAAAGAGTCGAAATTACCGTTCACGGTCTAGATCTCACGGGTATCATCGATCTAGGTCAAGGTCACCCCCATATAGACGGTATCATTCACGATCAAGATCTCCTCAAGCATTTAGGGGACAATCTCCTAATAAACGTAATGTACCTCAAGGAGAAACAGAACGTGAATATTTTAACAGGTACAGAGAAGTTCCACCACCTTATGACATGAAAGCTTATTACGGGAGGAGTGTTGACTTCAGAGACCCATTTGAAAAAGAACGTTATCGAGAATGGGAGAGAAAATATAGAGAGTGGTATGAAAAATATTATAAAGGCTATGCTGCTGGAGCACAGCCTAGACCATCAGCAAATAGAGAGAACTTTTCTCCAGAGAGATTTTTACCACTTAATATCAGGAATTCTCCCTTCACAAGAGGCCGCAGAGAGGAGTACTCTGGTGGACAGAGTCATAGAAGTCGAAACATAGGTGGCAACTATCCAGAAAAGCTTTCCTCAAGAGACAGTCATAATCAGAAGGATAATACAAAGTCAAAAGAGAAGGAGAGTGAAAATGCTCCAGGAGATGGTAAAGGAAATAAACATAAGAAACACAGAAAAAGAAGAAAGGGGGAAGAAAGTGAAGGCTTTCTAAACCCAGAGTTATTAGAAACCTCTAGGAAATCAAGAGAGCCAACAAGTGGTGAAGAAAATAAAACAGACTCATTGTTTGTTCTCCCAAGTAGAGATGATGCTACACCTGTTAGAGATGAACCAATGGATGCTGAATCCATTACTTTTAAATCAGTGTCTGAAAAAGACAAGAGAGAAAAAGATAAACCTAAAGCGAAAGGTGACAAGACCAAACGGAAAAATGATGGATCTGCTGTGTCCAAAAAAGAAACTGTTGCAAAACCTGCTAAAGGACCTCAAGAAAAACTAGATGGAGAGCGTGAAAAATCTCCTCGATCTGAACCTCCACTTAAAAAAGCCAAAGAGGAGACTCCAAAGACTGACAGTGTGAAATCATCATCTTCCTCTCAAAAAGATGAAAAGATCATTGGTACCCCCAGAAAAGCTCACTCTAAGTCAGTAAAGGAACACCAGGAGACAAAACCAGTCAAAGAGGAAAAAGTGAAGAAGGACTACTCCAAAGACATCAAGTCAGAGAAGCTAACTAGTAAGGAAGAAAAGGCCAAGAAGCCTAATGAGAAAAGTAAACCACTTGATAGCAAGGGAGAAAAAAGGAAAAGAAAAACTGAAGAGAAAGGTGGAGATAAAGATTTTGAGTCATCTTCAATGAAAATCTCTAAATTAGAAGTAACTGAAATAGTGAAACCATCACCAAAGCGCAAAATGGAACTTGATATTGAAAAGCTGGATAGGACGCCTGAAAAAGACAAAATTTCATCATCAACTGCTCCAGCCAAAAAAATCAAGCTTAACAGAGAAACTGGTAAAAAAATTGGAAGTACAGAAAATATATCTAATACAAAAGAACCCTCTGAAAAATTGGAGTCAACATCTGGCAAAATTAAACAAGAAAAAATCAAAGGAAAGGTCAGGCGAAAAGTGACTGGAACTGAAGGATCCAGCTCAACACTTGTGGATTATACCAGTACCAGTTCCACTGGAGGCAGTCCTGTGCGGAAATCTGAAGAAAAAACAGATACAAAGCGAACTGTCATTAAAACAATGGAAGAATATAATAATGATAACACAGCTCCTGCTGAAGATGTTATTATTATGATTCAGGTTCCTCAATCCAAATGGGATAAAGATGACTTTGAATCTGAAGAAGAAGATGTTAAATCCACCACACAGCCTATATCAAGTGTAGGAAAACCTGCCAGTGTTATAAAAAATGTTAGCACTAAACCATCAAATGCAGTCAAATATACTGAAAAAGAAAGTGAGTCATCAGAGAAAATTCAGAAACTCACCAAGGAAGTGAGCCATGAAATTACACAGCATGAGGTCAAAAGTTCAAAAAACTCTGCATCTAGTGAAAAGGGGAAAACCAAAGATCGAGATCATTCAGTGTTGGAAAAGGAAAACCCAGAAAAGAGGAAGAACAGCACTCAGCCAGAGAAAGATAGTAATCTGGACCGTCTGAATGAGCAAGGAAATTTTAAAAGTCTGTCTCAATCTTCCAAAGAGACTAGAACTTCTGGCAAAGAAGATAAGCATGATTCCATTCGAGGTTCCTCAAATAAAGACTTCACTCCCAACAGAGACAAAAAAACTGATTATGACAACAGAGAGTATTCAAGTTCCAAACGTAGAGATGAAAGGAATGAATTAACAAGAAGAAAAGACTCTCCTTCTCGCAGTAAAGACTCTGCAGCTGGACAAAAAACTAAGCCAAGGGAGGAGAGAGATTTGCCTAAAAAAGGAACAGGAGATTCCAAAAAAAGTAACTCTAGTCCCTCAAGAGACAAAAAACCTCATGATCATAAAGCCACTTATGATACTAAACGTTCAAGTGAAGAGACAAAATCTGTAGATAAAAATCCCTGTAAAGATCGTGAGAAACATGTGTTAGAGGCAAAGAACAATAAAGAGTCAAGTGGCAATAAATCACTTTATATACTTAACCCACCGGACCCACAGATTGAGAAAGAGCAAGTTACTGGGCAAATTGATAAGAACACCATCAAGCCTAAACCCCAGTTAAGTCATTCCTCTCGACTGTCCTCTGACTTAACTAGAGAAACTGATGAAGCTGCTTTTGAACCAGATTATAATGAAAGTGACAGTGAAAGCAATGTATCTGTAAAAGAGGAAGAAACTTCAGGAAAAATTTCTAAGGAACTGAAAGATAAAGTAATGGAGAAAGCAAAAGAGAGCCTGGACATAGCAGCAGTCAGCCAGGTAGGTGTAACCAGGACCCAGAGTCAAAGCAGCCCTAGTGTCAGTCCAAGTAGAAGTCATAGCCCTTCTGGAAGCCAAACCCGAAGCCACAGTAGCAGTGCTAGCTCTGCAGAAAGTCAGGACAGCAAGAAGAAGAAGAAAAAGAAGGAAAAGAAAAAGCACAAGAAACATAAAAAACATAAGAAGCATAAGAAGCATGCAGGCACTGAAGTAGAATTGGAAAAAAGCCAAAAACACAAACATAAGAAAAAGAAGTCAAAGAAGAGCAAAGATAAAGAAAAGGAGAAGGAGAAGGATGACCAAAAAGTGAAATCTGTCACTGTGTAA

Related Sequences

bmy_07481T0 Protein

Length: 1752 aa      View alignments
>bmy_07481T0
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDDNALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTSKAIDDSSASISLAQLTKTANLAEANASEEDKIKAMMSQSGHEYDPVNYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPIPPPRPLIQRNLQPLMRSPISRQQDPLMIPVTSSSAHPAPSISSLTSNQSSLAPPVPGNPSSTPAPVPDITATVSISVHSEKSDGPFRDSDNKILPAAALASEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSLLHGQLIPTTGPVRINTARPGGGRPGWEQSINRGRHHSERSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVPPPGFPPAPANLSTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQSPNKRNVPQGETEREYFNRYREVPPPYDMKAYYGRSVDFRDPFEKERYREWERKYREWYEKYYKGYAAGAQPRPSANRENFSPERFLPLNIRNSPFTRGRREEYSGGQSHRSRNIGGNYPEKLSSRDSHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRRKGEESEGFLNPELLETSRKSREPTSGEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKREKDKPKAKGDKTKRKNDGSAVSKKETVAKPAKGPQEKLDGEREKSPRSEPPLKKAKEETPKTDSVKSSSSSQKDEKIIGTPRKAHSKSVKEHQETKPVKEEKVKKDYSKDIKSEKLTSKEEKAKKPNEKSKPLDSKGEKRKRKTEEKGGDKDFESSSMKISKLEVTEIVKPSPKRKMELDIEKLDRTPEKDKISSSTAPAKKIKLNRETGKKIGSTENISNTKEPSEKLESTSGKIKQEKIKGKVRRKVTGTEGSSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTTQPISSVGKPASVIKNVSTKPSNAVKYTEKESESSEKIQKLTKEVSHEITQHEVKSSKNSASSEKGKTKDRDHSVLEKENPEKRKNSTQPEKDSNLDRLNEQGNFKSLSQSSKETRTSGKEDKHDSIRGSSNKDFTPNRDKKTDYDNREYSSSKRRDERNELTRRKDSPSRSKDSAAGQKTKPREERDLPKKGTGDSKKSNSSPSRDKKPHDHKATYDTKRSSEETKSVDKNPCKDREKHVLEAKNNKESSGNKSLYILNPPDPQIEKEQVTGQIDKNTIKPKPQLSHSSRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEETSGKISKELKDKVMEKAKESLDIAAVSQVGVTRTQSQSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKSKDKEKEKEKDDQKVKSVTV*