Part of scaffold_316 (Scaffold)

For more information consult the page for scaffold_316 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC1A3 ENSTTRG00000010879 (Bottlenosed dolphin)

Gene Details

solute carrier family 1 (glial high affinity glutamate transporter), member 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010322, Bottlenosed dolphin)

Protein Percentage 99.29%
cDNA percentage 98.97%
Ka/Ks Ratio 0.10643 (Ka = 0.0033, Ks = 0.031)

SLC1A3 ENSBTAG00000018245 (Cow)

Gene Details

Excitatory amino acid transporter 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024287, Cow)

Protein Percentage 98.81%
cDNA percentage 95.87%
Ka/Ks Ratio 0.03728 (Ka = 0.0057, Ks = 0.152)

SLC1A3  (Minke Whale)

Gene Details

solute carrier family 1 (glial high affinity glutamate transporter), member 3

External Links

Gene match (Identifier: BACU015013, Minke Whale)

Protein Percentage 87.38%
cDNA percentage 90.79%
Ka/Ks Ratio 0.77867 (Ka = 0.0938, Ks = 0.1204)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1263 bp    Location:649425..665507   Strand:+
>bmy_07493
ATGGCGGCCCTAGATAGTAAGGCGTCAGGGAAGATGGGGATGCGAGCTGTAGTCTATTACATGACTACGACCATCATTGCCGTGGTGATTGGCATAATCGTTGTCATCATCATCCATCCTGGGAAGGGCACAAAGGAAAACATGCACAGAGAAGGCAAAATTGTACAAGTGACAGCTGCAGACGCCTTCCTGGACTTGATCAGGAATATGTTCCCTCCAAATCTGGTGGAAGCTTGCTTTAAACAGTCCAATGAAACACTTGTGGGTGCCGTGATAAATAATGTGTCAGAGGCCATGGAGACTCTGACGAGGATCACAGAGGAGTTAGTCCCAGTGCCAGGGTCTGTGAATGGGGTCAATGCCCTGGGACTAGTTGTCTTCTCCATGTGCTTCGGATTTGTGATTGGAAACATGAAGGAGCAGGGCCAGGCCCTGAGAGAGTTCTTTGATTCTCTTAACGAAGCCATCATGAGATTGGTAGCGGTGATAATGTGGTACGCCCCTCTGGGCATCCTCTTCCTGATTGCAGGGAAAATTGTTGAGATGGAAGACATGGGAGTCATTGGCGGGCAGCTTGCCATGTACACAGTGACAGTCATCGTGGGCTTACTCATCCATGCCGTCATTGTCCTGCCCCTCCTCTACTTCTTGGTAACGCGGAAAAACCCCTGGGTTTTCATCGGCGGGTTGCTGCAAGCGCTCATCACGGCTCTGGGAACCTCCTCCAGCTCTGCCACCCTACCCATCACCTTCAAGTGCCTGGAAGAGAACAATGGCGTGGACAAACGTGTCACCAGATTCGTGCTCCCAGTAGGGGCCACCATTAACATGGATGGGACCGCCCTCTATGAGGCTTTGGCTGCCATTTTCATTGCTCAAGTTAACAACTTCGACCTGAACTTTGGACAGATTATTACAATCAGTATCACAGCCACGGCTGCCAGTATCGGGGCAGCTGGGATTCCTCAGGCGGGCCTGGTCACCATGGTCATCGTGCTGACATCTGTGGGCCTGCCCACCGACGACATCACGCTCATCATCGCAGTGGACTGGTTCCTGGACCGTCTTCGTACCACCACCAACGTGCTGGGAGACTCCCTGGGAGCTGGCATTGTTGAACACTTGTCACGACATGAACTGAAGAACCGGGATGTCGAAATGGGTAACTCAGTGATTGAAGAGAATGAAATGAAGAAACCATATCAGCTGATTGCCCAGGAAAGCGAAATTGAGAAATCCATTGATAGTGAGACCAAGATGTAG

Related Sequences

bmy_07493T0 Protein

Length: 421 aa      View alignments
>bmy_07493T0
MAALDSKASGKMGMRAVVYYMTTTIIAVVIGIIVVIIIHPGKGTKENMHREGKIVQVTAADAFLDLIRNMFPPNLVEACFKQSNETLVGAVINNVSEAMETLTRITEELVPVPGSVNGVNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNEAIMRLVAVIMWYAPLGILFLIAGKIVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALITALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFDLNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIEENEMKKPYQLIAQESEIEKSIDSETKM*