Part of scaffold_316 (Scaffold)

For more information consult the page for scaffold_316 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NUP155 ENSTTRG00000001158 (Bottlenosed dolphin)

Gene Details

nucleoporin 155kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001088, Bottlenosed dolphin)

Protein Percentage 96.95%
cDNA percentage 97.43%
Ka/Ks Ratio 0.29923 (Ka = 0.0127, Ks = 0.0424)

NUP155 ENSBTAG00000002458 (Cow)

Gene Details

nuclear pore complex protein Nup155

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003193, Cow)

Protein Percentage 97.43%
cDNA percentage 95.53%
Ka/Ks Ratio 0.08377 (Ka = 0.0125, Ks = 0.1487)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3915 bp    Location:1280760..1211514   Strand:-
>bmy_07501
GCCGAAAAGCTGGCTTCAAATTCCCCACCCTATGAATCGGAAGTGCGTCATGCACTGGCGCCGGGGCGCTTGTTTGGCGCGCGCGCTCTAAGCTTTGGGGCTGAGCTAGCATCTTGGGTTTTCTCTTATTTCTCCTTGCTTTTTGACTTTCTCCGGTCGCTGCCGTCTCCGATTTTCGATATGCCGTCTTCTTTGCTGGGCTCGGCAATGCCGGCCTCCACGTCGGCCGCAGCCCTGCAGGAAGCTTTGGAAAATGCGGGGCGGCTCATCGACCGTCAGTTGCAAGAAGACCGCATGTACCCGGACCTTTCCGATCTGCTCATGGTGTCTGCCCCAAATAATCCCACTGTTTCTGGCATGTCAGATATGGATTATCCTCTACAAGGACCTGGTTTGCTGTCAGTACCCAACCTGCCAGAGATCAGTTCCATTCGAAGAGTTCCTCTCCCACCTGAACTTGTTGAACAGTTTGGACATATGCAGTGTAACTGCATGATGGGCGTGTTCCCTCCTATCAGTAGAGCTTGGCTCACAATCGACAGTGACGTATTCATGTGGAACTACGAAGATGGAGGAGACCTTGCCTATTTTGATGGACTTAGTGAGACTATTCTTGCTGTGGGGCTTGTGAAACCAAAAGCTGGCATCTTTCAACCTCACGTACGACATCTCCTGGTTTTGGCAACCCCTGTGGATGTAGTGATTCTTGGACTCAGTTCTGGAGTTCTCAATGACAGTATGTGTGGTGGAATGCAGTTACTTCCAGATCCTTTATATTCTCTTCCTACTGATAATACTTACCTTTTAGCAATAACTTCCACTGATAATGGCAGAATTTTCTTGGCTGGAAAGGATGGCTGTTTATATGAAGTAGCATACCAAGCAGAAGCAGGTTGGTTTAGCCAGAGGTGTAGGAAAATAAACCACTCAAAGAGTGCACTTTCTTTCCTTGTTCCTTCGTTACTACAGTTCACATTCTCAGAAGATGATCCTATTGTTCAAATTGCAATTGATAATTCAAGAAATATTTTATATACACGATCGGAGAAAGGAGTAATACAAGTGTATGATTTGGGCCATGATGGACAAGGAATGAACAGAGTTGCCTCAGTGTCACAGAATTCTATTGTTTCTGCTGCTGGAAACATTGCTAGGACCATAGATCGTTCTGTTTTTAAACCAATTGTTCAAATAGCAGTGATTGAAAACTCCGAATCACTGGACTGTCAGTTATTGGCGGTCACACATGCAGGTGTAAGACTATATTTCAGCACTTGTCCGTTCAGACAGCCATGGGCACGCCCTAATACATTGACACTGGTCCACATCCGCTTACCTCCTGGATTCTCAGCATCTTCAACGGTGGAAAAGCCTTCAAAAGTACATAAAGCTCTTTATAGTAAAGGTATTCTACTGATGGCAGCCTCAGAAAATGAAGATAATGACATTTTGTGGTGTGTCAACCATGATACATTTCCTTTCCAAAAGCCAATGATGGAAACCCAGATGACTACTCGTGTTGATGGTCATTCCTGGGCTCTTTCTGCAATAGATGAGTTCAAAGTAGATAAGATAATCACACCCTTAAATAAGGATCATATTCCCATAACTGACTCACCAGTTGTTGTACAGCAGCACATGTTGCCTCCAAAGAAGTTTGTTCTCCTCTCAGCACAGGGGAGTCTTATGTTTCATAAACTTAGACCTGTAGATCAACTGAGGCATCTACTTGTGAGTAATGTGGGTGGAGATGGAGAAGAGATTGAAAGATTCTTTAAATTACATCAGTGTACTAGTTCTCCTGTTCCTAGTGGTAGTACATACCTGAATCCATCCTTTTTGGGAACACCATCTCAAGGTGTCCATCCTCCTGCCATGTCAACTCCAGTGTGTGCTGTGGGAAATCCAGCAACTCAGGCCACAAGTATGAGTTGTATGGCTGGGCCAGAGATTGTAAACATCTGGGATGCTAGTTTAGTTGTGGAGAGAGTATTCAAGAGTGGCAACAGAGAGATCACTGCAATTGAAAGTAGTGTTCCCTCCCAGCTGCTGGAGTCAGTGCTACAAGAACTGAAAGAGGCTCAACTGAGTGAAAAGGTTTCACTTCAGGCAATCCAGCAGTTGGTTCGAAAATCATACCAGGCTCTGGCTTTATGGAAACTTCTTTGTGAACATCAGTTCACTGCCATTGTAGGAGAACTTCAGAAGGAATTTCAAGAACAGTTGAAAATCACCACCTTTAAAGATCTGGTAATCAGGGACAAGGAACTGAGCGGGGCATTAATTGCTTCTCTAATCAACTGCTACATCAGAGATAATGCTGCTGTTGATGGCATTAGTTTACACTTACAGGACATCTGCCCACTTCTGTATAGCACTGATGATGCAGCAAATGAGCTTCTCCAGCGTTCCCGACAAGTTCAAAATAAGATTGAAAAGGAAAGAATGTTAAGGGAATCATTAAAGGAGTATCAAAAAATCAGCAATCAAGTGGACCTGTCCAGTGTTTGTGCTCAGTATAGACAAGTGCGTTTTTATGAGGGTGTAGTGGAGCTCTCTCTTACTGCTGCAGAGAAAAAAGATCCTCAGGGTCTTGGACTTCATTTCTATAAACATGGAGAACCAGAAGAAGACATCGTGGGACTTCAGGCTTTCCAAGAAAGATTAAACAGTTACAAGTGTATTACAGATACACTTCAAGAACTGGTAAATCAAAGTAAGGCTGCTCCTCAGTCTCCCAGTGTACCCAAAAAACCTGGACCTCCAGTGTTGTCATCTGATCCCAATATGCTGAGTAATGAAGAAGCAGGCCATCATTTTGAACAAATGCTTAAATTGTCTCAAAGATCCAAAGATGAACTCTTTAGTATTGCCCTTTATAATTGGCTAATACAAGCTGACCTTGCAGATAAACTGCTACAGATTGCTTCTCCATTTCTGGAGCCACATCTAGTCCGAATGGCCAAAGTTGATCAAAACAAAGTTCGTTACATGGATTTACTCTGGAGGTATTATGAGAAGAACAGAAGTTTTAACAATGCTGCTCGTGTCCTATCCAAATTGGCTGACATGCATAGCACAGAAATTTCACTTCAGCAGCGACTAGAGTACATTGCTCGTGCCATTCTTAGTGCCAAAAGTTCCACTGCCATTTCATCAATAGCTGCAGATGGTGAATTCCTTCATGAATTAGAAGAAAAAATGGAAGTTGCTAGGATCCAACTTCAGATACAAGAGACACTACAAAGGCAATATTCCCATCATTCTTCTGTACAGGATGCAATTTCTCAGCTGGACTCTGAGCTAATGGACATAACTAAGCTTTATGGGGAATTTGCTGACCCATTTAAACTTGCAGAATGTAAACTTGCAATAATTCATTGTGCCGGTTATTCAGACCCTATACTGGTGCAGACACTTTGGCAAGATATCATAGAGAAAGAACTGAATGAAAGTGTGACGYTGAGCTCCCCAGACAGGATGCACGCTCTTAGTCTCAAGACCGTGCTCCTCGGCAAGATGTATGCCAGCACACCTCGTTTCTTTCCTCTGGAGCAGCAAGTTTGTACTTTGAACTGGGATGTGGGTTTTGTGATACAGACAATGAATGAAATTGGAGTGCCATTACCTAGACTACTGGAAGTATATGATCACTTGTTCAAGTCACGGGATCCATTCTGGAACAGAATGAAGAAGCCACTGCACCTTTTGGATTGTATACATGTACTATTGACAAGATATGTTGAAAATCCTAGCCAAGTTTTAAATTGTGAGAGGAGGAGATTCACAAATCTCTGCCTGGATGCCGTTTGTGGTTATCTGGTTGAGCTCCAGTCTATGAGCTCCTCAGCAGCAATACAGGCCATCACTGGGAATTTTAAATCTCTTCAGGCTAAACTAGAACGGCTTCATTAA

Related Sequences

bmy_07501T0 Protein

Length: 1305 aa      View alignments
>bmy_07501T0
AEKLASNSPPYESEVRHALAPGRLFGARALSFGAELASWVFSYFSLLFDFLRSLPSPIFDMPSSLLGSAMPASTSAAALQEALENAGRLIDRQLQEDRMYPDLSDLLMVSAPNNPTVSGMSDMDYPLQGPGLLSVPNLPEISSIRRVPLPPELVEQFGHMQCNCMMGVFPPISRAWLTIDSDVFMWNYEDGGDLAYFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDVVILGLSSGVLNDSMCGGMQLLPDPLYSLPTDNTYLLAITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSALSFLVPSLLQFTFSEDDPIVQIAIDNSRNILYTRSEKGVIQVYDLGHDGQGMNRVASVSQNSIVSAAGNIARTIDRSVFKPIVQIAVIENSESLDCQLLAVTHAGVRLYFSTCPFRQPWARPNTLTLVHIRLPPGFSASSTVEKPSKVHKALYSKGILLMAASENEDNDILWCVNHDTFPFQKPMMETQMTTRVDGHSWALSAIDEFKVDKIITPLNKDHIPITDSPVVVQQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQCTSSPVPSGSTYLNPSFLGTPSQGVHPPAMSTPVCAVGNPATQATSMSCMAGPEIVNIWDASLVVERVFKSGNREITAIESSVPSQLLESVLQELKEAQLSEKVSLQAIQQLVRKSYQALALWKLLCEHQFTAIVGELQKEFQEQLKITTFKDLVIRDKELSGALIASLINCYIRDNAAVDGISLHLQDICPLLYSTDDAANELLQRSRQVQNKIEKERMLRESLKEYQKISNQVDLSSVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKLSQRSKDELFSIALYNWLIQADLADKLLQIASPFLEPHLVRMAKVDQNKVRYMDLLWRYYEKNRSFNNAARVLSKLADMHSTEISLQQRLEYIARAILSAKSSTAISSIAADGEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAISQLDSELMDITKLYGEFADPFKLAECKLAIIHCAGYSDPILVQTLWQDIIEKELNESVTLSSPDRMHALSLKTVLLGKMYASTPRFFPLEQQVCTLNWDVGFVIQTMNEIGVPLPRLLEVYDHLFKSRDPFWNRMKKPLHLLDCIHVLLTRYVENPSQVLNCERRRFTNLCLDAVCGYLVELQSMSSSAAIQAITGNFKSLQAKLERLH*