Sequence detailsbmy_07520 (Coding sequence)

Part of scaffold_317 (SequenceType object (1))

For more information consult the page for scaffold_317 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMC3ENSTTRG00000014563 (Bottlenosed dolphin)

Gene Details

transmembrane channel-like 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013810, Bottlenosed dolphin)

Protein Percentage 87.95%
cDNA percentage 89.67%
Ka/Ks Ratio 0.47785 (Ka = 0.0497, Ks = 0.1039)

TMC3ENSBTAG00000012166 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053166, Cow)

Protein Percentage 86.22%
cDNA percentage 87.78%
Ka/Ks Ratio 0.26026 (Ka = 0.083, Ks = 0.3189)

Additional orthologs identified in other species via the OPTIC pipeline.

TMC3 (Human)   Tmc3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3444 bp    Location:1264256..1214488   Strand:-
Raw sequence 
>bmy_07520
ATGTTTCACTACCAAATACCAAAGGGTGCTGCTGATGGGCTTCTCGCTGATGCTACAAGTTTCAACCTCCACACAGAAGCGCTCAACCTACTCCTTTGTGGTCCAGCGGGACTCCCCACCCCCATCCCAGACCCAGCAGAAGCTCTGAGCATCGGCTACAGACGTGCAGTCCAGCTCCTGAGAACTGGAGGGCAGAGCACCTCGCAGATCCAGTTCAGAAACCTCCGCTGGAGCAGACTCCTGCCTGCCGGCTTCCCAGCGCCCTGCCCACCAGTACTAATCACTGGCAGCCAGTCTGCTCCCATGAAACCATCAAAGGCATCCCAGCGTTATAGGAGCATCCGGAGAAATGCCAGCCAGCACTACTTCTACCAGGAGTCCCTGCTGCTCAGCAACTTGGATGACAGCTTTACTGCTGATGAAACAGGGGACAGCCATGATCCAGAACAAATCTTCCAGAATATACAGTTCCAGAAAGATCTCATGGCAAACATTCGCTGCCGACCCTGGACCATGGGACAGAAGCTGAGGGCACTGAGGCGAGCGAAGGACATTGTGCTGAAGTTTGAGGGGAGGCTGACCAGGACCCGAGGCTACCAAGCGGCAGGTGCAGAGCTGTGGCGGAAGTTTGCTCGTCTGGCCTGTAACTTTGTGGTCATCTTCATCCCCTGGGAAATGAGGATAAAGAAAATCGAGAGTCATTTTGGATCTGGTGTTGCCTCTTATTTCATATTCTTGAGATGGTTATTTGGAATTAATATTGTGCTCACGATTATGACAGGTGCTTTTATTGTCATTCCAGAGCTCATTGCAGGCCAACCCTTTGGAAGCACAGCCAGCAAGACCATCCCCAAGGAGCACATTGCATCTGCCCAGGATCTGGACACCGTCTGGTCCCTGGGGGGTTACCTCCAATACTCAGTCCTCTTCTATGGCTACTATGGCAGTGAGAGAAGGATCGGGAGGGCTGGCTACCGGCTGCCCTTGGCCTATTTCCTGGTGGGGATGGCAGTAGGCGGCAGAGAGCAAAACCGCTGCCATCGTGAACAGCATCAGGGAGGCTATACTGGAAGAACAGGAGAAGAAAAAGAACAAAAACCTGGTGCCCTGTGCAGAGCCCGGTATATCGTCCTCATACCTGCCTCTCCCCGCAGGGCAGTGACCATCTGCCTGAGGGTCGTTGCCAACATCTTGGTGCTTCTCTCGCTGGCTGGGAGCATCTATCTCATCTACTTCGTGGTGGACCGGTCCCAGAAGCTGGCACAGGCCAAGAAGGAGCTGACGCTCTGGGAGAAGAACGAGGTGAGCGTGGTGGTCTCCCTCGTCACCATGCTGGCACCATCAGCCTTTGACCTCATCGCTGCCTTGGAGATGTACCACCCACGGACCACACTGCGCTTCCAGCTGGCAAGGGTCCTTGTGCTGTACCTGGGAAACCTCTACAGTCTGATCATCGCCCTCTTGGACAAAGTTAACAGCATGAGCACTGAGGAAACTGCTCCCCCAAATAGCACAAGTCATTGGATAGATTCTACCATCTTCTTTGTCACCAGGGCAGCCCCTGGAGAAGAGAAGTGGTCCACGCCTGGGCCTGGGATAGGGCTCAGGAGAAACAGCACTTGGGCCCTGGAACAAGCCAATCTTCTGACTTACACCTCGCCTCTCTCAGAGGCCAACAAGACCACTGCTTCCACCCAGAGTCCGCAAGGCCAATGCTGGGAGACATACGAGATGCTGAAGCTCTCCATCATTGACATGCTCTTCACTGTGGCCAGCATTCTGCTCATAGACTTCTTCCGAGGACTTTTCGTTCGGTACTTAAGTGACTACTGGTGTTGGGACCTGGAGAGCAAGTTTCCTGAATACGGGGAATTCAAAATAGCAGAGAACGTGTTACATTTAGTCTACAACCAAGGAATGATTTGGATGGGGGCCTTCTTCTCGCCATGTCTCCCTGCCTTCAACGTCCTCAAACTCATTGGGCTCATGTACCTGCGCAGCTGGGCCGTGCTGACCTGCAACGTGCCCCACCAGCAAGTCTTCCGAGCCTCCAGATCCAACAACTTCTACCTGGCAATGCTCCTGTTTATGCTCTTCCTATGCATGCTGCCAACCATTTTTGCTATTGTCCGGTACAAGCCATCTCTAAATTGCGGGCCATTTAGCGGACAAGAGAAAATTTATGACATCGTGTCAGAAACGATTGAGAAGGATTTTCCCGCATGGTTTGGCTCTGTGGTTGGGTACATCAGTAGCCCTGTGGTTATCCTGCCAGCTGTGCTGCTTCTTTTCATGCTCATCTATTACCTTCAGAGCATCGCAAGATCCTTAAAGCTCAGCAACCACCAGCTCAGAATGCAGATCCAAAACGCAACCCGCATCCAAACCCAAGACGAAAGCACCAAGAGGTTTCCAAAGGACAGCGATTTCGGCAGCCAGCTGTCCTCGGCTCACTCGGCGACACCTCAAAACAATGGCAATGTGGTCAATTTCGACTCATCGAGTAGCAAGAGTAGCAGGGTGGAGACCGTCACCCAGCCCACGCCCCCGAGTCCCCAGCCAGGACCAGGCAGTCCCAGCTTGCCTCTTCCTGGCATCTCCAGATCCGGGCGCAACTCTACCAGGTATCCACGTGGCCTGTGTGCAAGCACAGGTGATCTTTACAGGAAGAGATCCTGCACACCTGGAATGTTTACAAAGCACATCGAAGACGTTCACTCGGAGCCTCTTTTCCCAAAAGACCTTCAGCAAATCGACCATGGATCAAGGGTCTCAGCCTTGGTGCCACGGGGTCGTAGGTCCCGTGCCCCCAGATACTATATGGTTAATGAACGTGACCCTCACCAAAAAAACCATTCAACTTTCTGGCCAGAAAGACGTTTCAAGATAGACATCTTTGGGGACGCTGTGGAGATGTACCCCAGGAACATGCAACAGTGTATGCCCTGGGCCTCTCCACAGCTCAGTGAAGAAGAGGAGGAGATGCAGAGGAGAAAAGTGAGCAGGCGGGCTTTCTACCCACGCTCCCTGACCGACCTCCACGGGGCTCCTCATTTTTATGTTGGCAAAAGGTTAGAAAGTCAGGGCCTGTCTCCTGAGCTCCAGAGATGGACGCATTACAAATCTTGGAATGATGGCGTTGAGGGTCAGCTTGACCGGCCAATGTATGTGCATAAAAAGCCACGCTACCGGAATTTCCAACACCCCCAGCACCCTCTGAAGCCCAGAGTTAAGGCCAAGTTCGAGCCATCCGTCACAGAATCTGATTCCATGTCGGCAGCATCCAGCAGTGACCAGCAGAACAGCAGCACCGACCAGTGTCTCCAGGTCACCCGCAGCCATCCCAAGTTTCCGAGGTCTGCGGGCCAGTTTGGCAGGAGRAAGGCCATATCTAGGCAGGAGCTGACCACAGATCTGAATGACCTGATCTGTTCAAATGTCTAG

Related Sequences

bmy_07520T0 SequenceType object (3)

Length: 1148 aa      View alignments
>bmy_07520T0
MFHYQIPKGAADGLLADATSFNLHTEALNLLLCGPAGLPTPIPDPAEALSIGYRRAVQLLRTGGQSTSQIQFRNLRWSRLLPAGFPAPCPPVLITGSQSAPMKPSKASQRYRSIRRNASQHYFYQESLLLSNLDDSFTADETGDSHDPEQIFQNIQFQKDLMANIRCRPWTMGQKLRALRRAKDIVLKFEGRLTRTRGYQAAGAELWRKFARLACNFVVIFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVIPELIAGQPFGSTASKTIPKEHIASAQDLDTVWSLGGYLQYSVLFYGYYGSERRIGRAGYRLPLAYFLVGMAVGGREQNRCHREQHQGGYTGRTGEEKEQKPGALCRARYIVLIPASPRRAVTICLRVVANILVLLSLAGSIYLIYFVVDRSQKLAQAKKELTLWEKNEVSVVVSLVTMLAPSAFDLIAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIALLDKVNSMSTEETAPPNSTSHWIDSTIFFVTRAAPGEEKWSTPGPGIGLRRNSTWALEQANLLTYTSPLSEANKTTASTQSPQGQCWETYEMLKLSIIDMLFTVASILLIDFFRGLFVRYLSDYWCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYKPSLNCGPFSGQEKIYDIVSETIEKDFPAWFGSVVGYISSPVVILPAVLLLFMLIYYLQSIARSLKLSNHQLRMQIQNATRIQTQDESTKRFPKDSDFGSQLSSAHSATPQNNGNVVNFDSSSSKSSRVETVTQPTPPSPQPGPGSPSLPLPGISRSGRNSTRYPRGLCASTGDLYRKRSCTPGMFTKHIEDVHSEPLFPKDLQQIDHGSRVSALVPRGRRSRAPRYYMVNERDPHQKNHSTFWPERRFKIDIFGDAVEMYPRNMQQCMPWASPQLSEEEEEMQRRKVSRRAFYPRSLTDLHGAPHFYVGKRLESQGLSPELQRWTHYKSWNDGVEGQLDRPMYVHKKPRYRNFQHPQHPLKPRVKAKFEPSVTESDSMSAASSSDQQNSSTDQCLQVTRSHPKFPRSAGQFGRRKAISRQELTTDLNDLICSNV*