Sequence detailsbmy_07542 (Coding sequence)

Part of scaffold_314 (SequenceType object (1))

For more information consult the page for scaffold_314 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COMMD5ENSBTAG00000018455 (Cow)

Gene Details

COMM domain-containing protein 5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000024561, Cow)

Protein Percentage 92.59%
cDNA percentage 92.95%
Ka/Ks Ratio 0.11016 (Ka = 0.0335, Ks = 0.3044)

COMMD5 (Minke Whale)

Gene Details

COMM domain containing 5

External Links

Gene match (Identifier: BACU011409, Minke Whale)

Protein Percentage 98.41%
cDNA percentage 98.59%
Ka/Ks Ratio 0.14686 (Ka = 0.007, Ks = 0.0474)

Additional orthologs identified in other species via the OPTIC pipeline.

COMMD5 (Human)   Commd5 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 570 bp    Location:163837..163268   Strand:-
Raw sequence 
>bmy_07542
ATGCCCCAGCTCCTGAGGGACCTGGACAGGGGCACGTTCAGAAAGTTGCTGAAGCTGGTGGTCAGCAGCCTGCAGGGAGAAGACTGCCGTGAGGCTGTGCGGCGCCTCGGGGCTGGCGCAGACCTGCCTGAGGAGCAGCTGGGTGCCCTGATCGCTGGCACACACACCCTGCTCCAGCAGGCCCTCCGGCTGCCCCCGGCCAGCCTGAAGCCCGATGCCTTCAAGAACCAGCTCCAGGAGCTCTGCATCCCCCAAGACCTGGTCGTGGACTTGGCTAGTGTGGTGTTTGGGAGCCAGCGGCCTCTCCTTGACTCTGCGGCCAGGCAGCAGGGGGCCTGGCTGCCCCATGTTGCCGACTTTCGGTGGAGGGTGGACGTGGCCATCTCCACCAGCGCCCTGGCCCGCTCCCTGCAGCCAAGTGTCCTGATGCAGCTGAAGCTCTCGGATGGGTCGGCCTTCCGCTTCGAGGTCCCCACGGCCAAGTTCCAGGAGCTGCGGTTCGGTGTGGCCATGGTCCTGAAGGAGATGGCCGACCTGGAGAAGAGGTGCGAGCGCAAACTGCAGGGCTGA

Related Sequences

bmy_07542T0 SequenceType object (3)

Length: 190 aa      View alignments
>bmy_07542T0
MPQLLRDLDRGTFRKLLKLVVSSLQGEDCREAVRRLGAGADLPEEQLGALIAGTHTLLQQALRLPPASLKPDAFKNQLQELCIPQDLVVDLASVVFGSQRPLLDSAARQQGAWLPHVADFRWRVDVAISTSALARSLQPSVLMQLKLSDGSAFRFEVPTAKFQELRFGVAMVLKEMADLEKRCERKLQG*