Sequence detailsbmy_07562 (Coding sequence)

Part of scaffold_314 (SequenceType object (1))

For more information consult the page for scaffold_314 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC39A4ENSTTRG00000001940 (Bottlenosed dolphin)

Gene Details

solute carrier family 39 (zinc transporter), member 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001822, Bottlenosed dolphin)

Protein Percentage 91.31%
cDNA percentage 92.38%
Ka/Ks Ratio 0.24166 (Ka = 0.0194, Ks = 0.0802)

SLC39A4ENSBTAG00000046026 (Cow)

Gene Details

Zinc transporter ZIP4

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000012255, Cow)

Protein Percentage 84.07%
cDNA percentage 87.44%
Ka/Ks Ratio 0.19098 (Ka = 0.0832, Ks = 0.4355)

SLC39A4 (Minke Whale)

Gene Details

solute carrier family 39 (zinc transporter), member 4

External Links

Gene match (Identifier: BACU001453, Minke Whale)

Protein Percentage 96.71%
cDNA percentage 96.76%
Ka/Ks Ratio 0.26157 (Ka = 0.0206, Ks = 0.0789)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC39A4 (Human)   Slc39a4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2103 bp    Location:375633..380117   Strand:+
Raw sequence 
>bmy_07562
ATGCCTGGAGAGCCTCGCCGGGGCGGGCGGGTCCCAGCCCAGCCCGAGTCTGGCACCAGGCAGCCCATGCGGCCCACAGCCACCCAGGCGACCATGGCCTCCCTGGAACTCAGAGCACCCGGGGGCCGCAGCTTGGTTGGCCTGGCCGGGCCCAAGCCAGGGCTGCTGCTGGCCGCGCTGGCCGCGCTGGCGTTGACCGGGACGGCGACCCCACCTGCCCGTCTGCTGACCCTGCTGTCCTCAGGCCAGGGTGTTCTGGACCGCATGGCGCTGGGCAGCCTGTTAAATACACTAGCGGCCCGTGTGCACTGCGCCGACGGGCCGTGTGGAAAGTGCCTGTCTGTGGAAGACGCCCTGGCCCTGGGCAGGCCTGAGAAGCCAGGGCTCCGGTCCGGTCCGGCCCTGGAGCCCAGGCACATCGCCCGCCTCAGTGCTGCCGCCGCCCTCTACCTCAGCAACCCGGAGGGCACCTGTGCGGATGTCCGGGCTGGCCGCTGGGCCTCCCGCGCCAACCAGCTCCTGGCGCTGCTCGAGAGCCCTGAGGCCCTGACCCCAGGCCTGACCAGGCTGCTGCAGAAGATTCAGGCCCAGGCTGCTGGCCGGCCCACTTCTGCGGAGGCCTGTGTAGACCTGCCTCAGCTGTTGGAGGAAGCGGCGGGGGTGGGGTCTCCCGGCAGCCCCGGCCCAGTGCTGGCTGCCCTGCTGGACCACGTCAGGAACGGGTCCTGCTTCCGAGCCCTGCCGACTCCTCAGTACTTCGTGGACTTCGTGTTCCGGCAGCACAGCAGCGAGAACCCCAACATCACACTGGCTGAGCTGGAGGCCTTGATGCAGCGCCTGGGGGTGGGCGGAGCGACCGAGACCCATGGTGACCACAGTGACCACGGTCATCTGGGAGAGGGGGCCAACCGCCAGGGCCCTGTGCCCCTTGCCACCCCCAACAGCAGCTCCAGCATGTGGGACACAGTATGCCTGAGTGCTGGAGATGTGATGGCTGTGTATGGGCTGTCTGAGCAGGCTGGGGTGACACCAGAGGCCTGGGCCCAACTGAGCCCTGCCCTGCTCCAGCAGCAACTGAGTGGGGCCTGCAGCCCCCAGCCTGAGCAGCCCACCCAGGACCAGCTCAGCCAGGTGGAGAGGTACCTATATGGCTCACTGGCTACGCTGCTCATCTGCCTCAGCTCCATTTTCGGGCTCTCGCTCCTCACCTGTGCCAAATGCAGCACTGCTACCCACTACATCATCCAGACCTTCCTGAGCATGGCTGTAGGTGCGCTCACAGGCGACGCCCTTCTGCACTTGACGCCTCAGGTGCTGGGGCTGCACTCGCATGATGGCGAAGGCCTTGGCTTGCAGCCCACCTGGCGCCTCCTAGCTGTGCTGGGTGGTCTCTATGCCTTCTTCCTGTTCGAGAGCCTCTTCAACCTCTTGCTACCCCTGGACCCGGAGGACCGAAAGGACGGGCCCTGCAGCCACGGACACAGTCACGGCGGCCACAGCCATGGCGTGTCCCTGCAGCTAGCGCCGAGCGATCTCCGGCCTCCCAAGCAGCCCCACGAGGGCTCGCGCGCAGACCTGGTGGCGGAGGAGAGCCCCGAACTGCTGAGCCCGGAGCCCCGGAGATTGAGCCCAGAGCTGAGACTGCTGCCCTACGTGATCACGCTGGGAGACGCCGTGCACAACTTCGCCGACGGTCTGGCCGTGGGCGCCGCCTTCTCGTCCTCCTGGAAGACGGGGCTGGCCACCTCGCTGGCCGTGTTCTGCCACGAGGTGCCGCACGAGCTGGGGGACTTCGCGGCCCTGCTGCACGCGGGGCTGTCGGTGCGCCGGGCGCTGCTGCTGAACTTGGCGTCGGGGCTCACGGCCTTCATCGGCCTCTACGTGGCGCTCGCGGTACGCGTCGGCGAAGACGGCGAGACCTGGATCCTGGCGGTAGCAACTGGCCTCTTCCTCTACGTGGCGCTCTGCGACATGCTCCCGGCCATGCTGAACGTGCGGGACCGGCGGCCCTGGCTCCTCTTCCTGCTGCACAACGTGGGCCTGCTGGGCGGCTGGACCGTCCTGCTGCTGTTGTCGCTGTATGAGGATAATATCACTCTCTGA

Related Sequences

bmy_07562T0 SequenceType object (3)

Length: 701 aa      View alignments
>bmy_07562T0
MPGEPRRGGRVPAQPESGTRQPMRPTATQATMASLELRAPGGRSLVGLAGPKPGLLLAALAALALTGTATPPARLLTLLSSGQGVLDRMALGSLLNTLAARVHCADGPCGKCLSVEDALALGRPEKPGLRSGPALEPRHIARLSAAAALYLSNPEGTCADVRAGRWASRANQLLALLESPEALTPGLTRLLQKIQAQAAGRPTSAEACVDLPQLLEEAAGVGSPGSPGPVLAALLDHVRNGSCFRALPTPQYFVDFVFRQHSSENPNITLAELEALMQRLGVGGATETHGDHSDHGHLGEGANRQGPVPLATPNSSSSMWDTVCLSAGDVMAVYGLSEQAGVTPEAWAQLSPALLQQQLSGACSPQPEQPTQDQLSQVERYLYGSLATLLICLSSIFGLSLLTCAKCSTATHYIIQTFLSMAVGALTGDALLHLTPQVLGLHSHDGEGLGLQPTWRLLAVLGGLYAFFLFESLFNLLLPLDPEDRKDGPCSHGHSHGGHSHGVSLQLAPSDLRPPKQPHEGSRADLVAEESPELLSPEPRRLSPELRLLPYVITLGDAVHNFADGLAVGAAFSSSWKTGLATSLAVFCHEVPHELGDFAALLHAGLSVRRALLLNLASGLTAFIGLYVALAVRVGEDGETWILAVATGLFLYVALCDMLPAMLNVRDRRPWLLFLLHNVGLLGGWTVLLLLSLYEDNITL*