Sequence detailsbmy_07569 (Coding sequence)

Part of scaffold_314 (SequenceType object (1))

For more information consult the page for scaffold_314 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCRT2ENSTTRG00000007039 (Bottlenosed dolphin)

Gene Details

scratch homolog 2, zinc finger protein (Drosophila)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006652, Bottlenosed dolphin)

Protein Percentage 61.9%
cDNA percentage 69.84%
Ka/Ks Ratio 0.08893 (Ka = 0.2755, Ks = 3.0986)

SCRT1ENSBTAG00000046208 (Cow)

Gene Details

transcriptional repressor scratch 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000054400, Cow)

Protein Percentage 93.2%
cDNA percentage 92.45%
Ka/Ks Ratio 0.09553 (Ka = 0.0384, Ks = 0.4017)

Additional orthologs identified in other species via the OPTIC pipeline.

SCRT1 (Human)   Scrt1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1233 bp    Location:454887..458251   Strand:+
Raw sequence 
>bmy_07569
GGCGGCACTGCGGGCTGGGAAGCCGGGACCAGAGGAGGAAAGGAAGGAAGGAAGGAAGAGAAGAGAGAAGAGAAGAGGAGAAGAGAGGAGAAGAGAATAGAAGAAGAGAAGAGAAGGAAGGAAGGAGACGAAGAGGGATCCGGAGGAGCAGAGGAGGAAACGCAGGACAGGCGGGCAGAAGAGAGGACGGCACTCGTGCGGCGGCATCCAAAGGCCAGAGTGGGGACCCGCGCTGCTTCCGCCGCTCCTCGGATGGTGACGGGGCCCCGCCGCGGCCGCAGCCCCCCCGCGTCCCGGCTCCGCAGGCCCACAGCGCCGGAGCCCTGCAGGAATCATGCCCAGATCCTTCCTGGTCAAGAAGACCTCGAGAGCTCCTACGGGCGCTCCCGAAGCGACCTCGGCGAGCGACTGCAGGAGAAAGGATACCTCAACGACTACGCGGGGCCTGCCTCTGTCTACGATGGCGACGCCGAGGCGGCCCTGCTCAAAGGGCCGTCCCCGGAGCCCATGTACGCTGCGGCCGTGCGGGGAGAGCTGGGCCCGGCGGCTGCGGGCTCGGCGCCGCCGCCCACCCCGCGCCCGGAGCTGGCCACAGCCGCGGGTGGCTACATCAACGGCGATGCGGCGGTCAGCGAGGGCTACGCTGCTGACGCCTTCTTCATCACCGACGGGCGCTCCCGCCGTAAGGCCGCCAACGCCAATGCCGCCGCCGCCCCCTCCACGGCCTCGGCGGCGGCCCCCGACGGCGACGGCGGAGGCGGGTGCGGCAAAACGTACGCCACGTCGTCGAACCTGAGCCGCCACAAGCAGACGCACCGCAGCCTGGACAGTCAGCTGGCGCGGCGCTGCCCGACGTGCGGCAAGGTGTACGTGTCCATGCCGGCCATGGCCATGCACCTGCTCACGCACGACCTGCGCCACAAGTGCGGCGTGTGCGGCAAGGCCTTCTCCAGGCCCTGGCTGCTGCAGGGCCACATGCGCTCCCACACCGGCGAGAAACCCTTCGGCTGCGCGCACTGCGGCAAGGCCTTCGCCGACCGCTCCAACCTGCGCGCGCACATGCAGACGCACTCGGCCTTCAAGCACTTCCAGTGCAAGCGCTGCAAGAAGAGCTTCGCGCTCAAGTCCTATCTCAACAAGCACTACGAGTCGGCCTGCTTCAAGGGCGCCGCCGCCGGCGGCCCCCCGGCCCCGGCGCCCGCCGCGTCGCCGCAGCTCAGCCCTGTGCAGGCC

Related Sequences

bmy_07569T0 SequenceType object (3)

Length: 411 aa      View alignments
>bmy_07569T0
GGTAGWEAGTRGGKEGRKEEKREEKRRREEKRIEEEKRRKEGDEEGSGGAEEETQDRRAEERTALVRRHPKARVGTRAASAAPRMVTGPRRGRSPPASRLRRPTAPEPCRNHAQILPGQEDLESSYGRSRSDLGERLQEKGYLNDYAGPASVYDGDAEAALLKGPSPEPMYAAAVRGELGPAAAGSAPPPTPRPELATAAGGYINGDAAVSEGYAADAFFITDGRSRRKAANANAAAAPSTASAAAPDGDGGGGCGKTYATSSNLSRHKQTHRSLDSQLARRCPTCGKVYVSMPAMAMHLLTHDLRHKCGVCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAFKHFQCKRCKKSFALKSYLNKHYESACFKGAAAGGPPAPAPAASPQLSPVQA