Sequence detailsbmy_07583 (Coding sequence)

Part of scaffold_314 (SequenceType object (1))

For more information consult the page for scaffold_314 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPATC1ENSTTRG00000002748 (Bottlenosed dolphin)

Gene Details

spermatogenesis and centriole associated 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002576, Bottlenosed dolphin)

Protein Percentage 50.11%
cDNA percentage 62.38%
Ka/Ks Ratio 0.33785 (Ka = 0.4574, Ks = 1.3539)

SPATC1ENSBTAG00000026350 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000037249, Cow)

Protein Percentage 77.12%
cDNA percentage 81.55%
Ka/Ks Ratio 0.31026 (Ka = 0.1558, Ks = 0.502)

Additional orthologs identified in other species via the OPTIC pipeline.

SPATC1 (Human)   Spatc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1407 bp    Location:684906..664173   Strand:-
Raw sequence 
>bmy_07583
ATGTCTCTACTCACCAATTATGAGGGGCTTCGGCATCAGATTGAGAGGCTGGTGCGGGAAAACGAGGAACTGAAGAAGCTGGTGCGGCTCATTCGGGAGAATCACGAGCTCAAGTCGGCGATCAAGATGCAGGCGGGTGGCCTGGGCATCAGCGGGTTCAGCAGCAGGCTGGGCGAGGCAGCGACCGGCCTTCCTCAACACCAGGGTGTCTTCCTGCCCCCGTCTCCGGCAGCAGCAAACGAACCCGTCCTGGAAGAAGTGGGGATTGTGGCTCTGGCGCCCCTGGCCGACGTGCTAAACAGCCCGCAGCCCAGCCCCGCGGCAGGCCCCGTCGTGAGCGCCCTGATGGGCCCTCTCAACACGCTGCTGCCCGGCCTGGAGCCCATCTCACAGAGCAGCCCACTCACCAGCCTCCTGACTGGCCCCCTGAGCAGCCACCTGGCCAGCCCCGTGGCAGTGCCCCTGGCAGGCACACCGGCCAGCTCCCTGGGCCTGCCCTCGACTGGCCCCCTGAATCCAAGCAGCCACCTGGCCAGCCCCGTGGCAGTGCCCCTGGCGGGCACACTGGCCANCTGGCCCCCTGAATCCAAGCAGCCACCTGGCCAGCCCCGTGGCAGTGCCCCTGGCGGGCACACTGGCCAGCTCCCTGGGCCTGCCCTCGACTGGCTCCCTGACTCCAAGCAGCCCCCTTACGGCCCCTATAACAGGTTCGGTGGTCCTCTCTCTGAGCAGCCCCCTGCTCCCCTCCACGGCTGCTCCCCTAGGTGTTTCTCAGAACCTTCCGGCCAATCCCATGAGCAATCTGGTGCTGTCCGAGGCCCCAAGGTCAACGACACCCGGGGTCCACGCGTGGCAGAGCCGTCTCGGAAAGGCATCCTGGAGTTGGAGCGGAAGCTAGCCCCCCGGAAGAGCGGCAAGCTCCCTGACAGCTCCCGAGAGTCGAAGCAGCTGGCCTGGGAGAGGCTGGTGGGGGAGATCGCCTTCCAGCTGGACCGCAGGATCCTGTCCAGCATCTTCCCCGAGCGTGTCCGGCTCTACGGCTTCACGGTCTCCAACATTCCGGAGAAGATCATCCAGGCCTCCCTGAAGCCCAGTGACCACAGGCTGGACGAGGAGCTGTGCCAGACCCTCACACAGCGCTACACAAGCATCATGAACCGGCTGCAGAGCCTGGGCTACAACGGGCGGGTGCACCCGGCGCTGACGGAGCAGCTGGTGAACGCCTATGGCATCCTGCGGGAGCGGCCCGAGCTGGCTGCGTCCGAGGGCGGTTCCTACACCGTGGATTTCCTGCAGCGGGTGCTGGTGGAGACCGTGCACCCCAGCGTGCTCACTGACGCACTGCTGTTGCTCTCCTGCCTCAGCCAGCTGGCGCGCGACGACGGCAAGCCCATGTTCATCTGGTGA

Related Sequences

bmy_07583T0 SequenceType object (3)

Length: 469 aa      View alignments
>bmy_07583T0
MSLLTNYEGLRHQIERLVRENEELKKLVRLIRENHELKSAIKMQAGGLGISGFSSRLGEAATGLPQHQGVFLPPSPAAANEPVLEEVGIVALAPLADVLNSPQPSPAAGPVVSALMGPLNTLLPGLEPISQSSPLTSLLTGPLSSHLASPVAVPLAGTPASSLGLPSTGPLNPSSHLASPVAVPLAGTLAXWPPESKQPPGQPRGSAPGGHTGQLPGPALDWLPDSKQPPYGPYNRFGGPLSEQPPAPLHGCSPRCFSEPSGQSHEQSGAVRGPKVNDTRGPRVAEPSRKGILELERKLAPRKSGKLPDSSRESKQLAWERLVGEIAFQLDRRILSSIFPERVRLYGFTVSNIPEKIIQASLKPSDHRLDEELCQTLTQRYTSIMNRLQSLGYNGRVHPALTEQLVNAYGILRERPELAASEGGSYTVDFLQRVLVETVHPSVLTDALLLLSCLSQLARDDGKPMFIW*