Part of scaffold_314 (Scaffold)

For more information consult the page for scaffold_314 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PUF60 ENSTTRG00000017088 (Bottlenosed dolphin)

Gene Details

poly-U binding splicing factor 60KDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016199, Bottlenosed dolphin)

Protein Percentage 99.2%
cDNA percentage 98.33%
Ka/Ks Ratio 0.04937 (Ka = 0.0035, Ks = 0.0705)

BT.56130 ENSBTAG00000037493 (Cow)

Gene Details

poly(U)-binding-splicing factor PUF60

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002882, Cow)

Protein Percentage 98.83%
cDNA percentage 94.61%
Ka/Ks Ratio 0.03096 (Ka = 0.008, Ks = 0.259)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1824 bp    Location:826086..833956   Strand:+
>bmy_07590
CAGGTCAATGGCCAGCAAGGAGGGGGGTCCGAGCCGGCGGCGGCGGCGGCGGCGGCAGTGGTGGCAGCGGGAGACAAATGGAAACCTTCACAGGGGACAGACTCCATCAAGATGGAGAACGGGCAGAGCACAGCCGCAAAGCTGGGACTGCCTCCCCTGACGCCTGAGCAGCAAGAGGCCCTCCAGAAGGCCAAGAAGTACGCCATGGAGCAGAGCATCAAGAGCGTACTGGTGAAGCAGACCATCGCCCACCAGCAGCAGCAGCTCACCAACCTGCAGATGGCAGCTCAGCGACAGCGGGCACTGGCCATCATGTGCCGGGTCTACGTGGGCTCCATCTACTACGAGCTGGGGGAGGACACCATTCGCCAGGCCTTTGCCCCCTTTGGACCCATCAAGAGCATTGACATGTCCTGGGACTCCGTCACCATGAAGCACAAGGTGAGGCTCCGTCCGCCCTGCCTTGCCCCACCCCTGGGCTCTCCGAGCCTAACGGCGTGTTCCCGCGTGCAGGGCTTTGCGTTTGTGGAGTACGAGGTCCCGGAGGCCGCGCAGCTGGCCTTGGAGCAGATGAACTCCGTGATGCTGGGCGGCAGGAACATCAAGGTGAGGCCGGGGGCGGGCCTCGGGGCCGGCTCGCGCGCGGCCGGCTGTGCTCTGTGCGCAGATGTAGAGCAGCCCCTCCAGGAGCCTGCAGCGAGCCGGCCTAGGCTGACTGGGCACTCTTCGTCCCTGCCTCTCCCCCAGGTGGGCAGACCCAGCAACATAGGGCAGGCCCAGCCCATCATAGACCAGCTGGCCGAGGAGGCGCGAGCCTTCAACCGCATCTACGTGGCTTCTGTGCACCAGGACCTCTCGGACGACGACATCAAGAGTGTGTTTGAGGCCTTCGGCAAGATCAAATCTTGCACACTGGCTCGGGACCCCACGACTGGCAAGCACAAGGGCTATGGCTTCATTGAATATGAGAAGGCCCAGTCGTCCCAGGATGCCGTGTCTTCCATGAACCTTTTTGACCTGGGTGGCCAGTACTTGCGGGTGGGCAAGGCTGTCACACCCCCTATGCCCCTGCTTACACCTGCCACACCTGGAGGCCTCCCGCCTGCTGCTGCTGTGGCCGCAGCTGCAGCCACAGCCAAGATTACGGCTCAGGAAGCAGTGGCTGGAGCAGCGGTACTGGGTACTCTAGCCACACCTGGACTGGTGTCCCCTGCCCTGACTCTGGCCCAGCCCCTGGGGGCTCTACCCCAGGCTGTCATGGCCGCCCAGGCCCCGGGAGTTATCACAGGTGTGACCCCGGCCCGGCCTCCCATTCCGGTCACCATCCCCTCTGTGGGAGTGGTGAACCCCATCCTGGCCAGCCCTCCGACACTCGGTCTCCTGGAGCCCAAGAAAGAGAAGGAGGAGGAGGAGCTGTTTCCCGAGTCGGAGCGGCCAGAGATGCTGAGCGAGCAGGAGCACATGAGCATCTCTGGCAGCAGCGCCCGCCACATGGTGATGCAGAAGCTGCTCCGCAAGCAGGAGTCCACAGTGATGGTTCTGCGCAACATGGTGGACCCCAAGGACATCGATGACGACCTGGAGGGGGAGGTGACCGAGGAGTGTGGCAAGTTTGGTGCTGTCAACCGTGTCATCATCTACCAGGAGAAGCAGGGCGAGGAGGAGGATGCGGAGATCATTGTCAAGATTTTTGTGGAGTTTTCCGTAGCCTCTGAGACTCACAAGGCCATCCAGGCCCTCAATGGGCGCTGGTTTGCTGGCCGCAAGGTGGTGGCTGAAGTGTATGACCAGGAGCGTTTTGATAACAGTGACCTCTCCGCGTGA

Related Sequences

bmy_07590T0 Protein

Length: 608 aa      View alignments
>bmy_07590T0
QVNGQQGGGSEPAAAAAAAVVAAGDKWKPSQGTDSIKMENGQSTAAKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKVRLRPPCLAPPLGSPSLTACSRVQGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVRPGAGLGAGSRAAGCALCADVEQPLQEPAASRPRLTGHSSSLPLPQVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLATPGLVSPALTLAQPLGALPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSVASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA*