Part of scaffold_314 (Scaffold)

For more information consult the page for scaffold_314 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCRIB ENSTTRG00000017087 (Bottlenosed dolphin)

Gene Details

scribbled planar cell polarity protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016198, Bottlenosed dolphin)

Protein Percentage 95.74%
cDNA percentage 95.74%
Ka/Ks Ratio 0.12303 (Ka = 0.0178, Ks = 0.145)

SCRIB ENSBTAG00000008421 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011082, Cow)

Protein Percentage 93.66%
cDNA percentage 90.56%
Ka/Ks Ratio 0.05907 (Ka = 0.0302, Ks = 0.5114)

SCRIB  (Minke Whale)

Gene Details

scribbled planar cell polarity protein

External Links

Gene match (Identifier: BACU001473, Minke Whale)

Protein Percentage 97.77%
cDNA percentage 97.96%
Ka/Ks Ratio 0.16334 (Ka = 0.0105, Ks = 0.0642)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3822 bp    Location:835042..854511   Strand:+
>bmy_07591
ATGCTCAAGTGCATCCCGCTGTGGCGCTGCAACCGGCACGTGGAGTCGGTAGACAAACGGCACTGCTCGCTGCAGGCCGTGCCCGAGGAGATCTACCGCTACAGCCGCAGCCTGGAGGAACTGCTCCTCGACGCCAACCAGCTGCGTGAGCTGCCCAAGCCCTTTTTTCGGCTGCTGAACCTGCGCAAGCTGGGCCTGAGTGACAACGAGATCCAGCGGTTGCCCCCTGAGGTGGCCAACTTCATGCAACTGGTGGAGCTGGACGTGTCTCGGAATGACATCCCTGAGATCCCCGAGAGCATCAAGTTCTGCAAAGCCCTGGAGATTGCAGATTTCAGTGGGAATCCTTTGTCCAGGCTCCCCGAAGGTTTCACTCAGCTGCGCAGCCTGGCTCATCTGGCCCTGAATGATGTGTCCTTGCAGGCGCTGCCTGGGGACGTGGGCAATCTCGCCAACCTGGTGACCTTGGAGCTCCGGGAGAATCTGCTCAAGTCCTTGCCTGCGTCCTTGTCTTTCCTGGTCAAGCTGGAACAGCTGGATCTGGGAGGCAACGATCTGGAAGTGCTGCCTGACACCCTGGGGGCCCTGCCCAACCTGCGTGAGCTGTGGCTGGACCGGAACCAGCTGTCGGCCCTGCCCCCGGAACTCGGGAATCTACGGCGCCTGGTGTGCCTGGATGTGTCAGAGAACCGGCTGGAGGAGCTGCCTGCGGAACTCGGGGGGCTGGTGCTGCTCACCGACCTGCTGCTCTCCCAGAACTTGCTGCAGCGCCTTCCTGACGGCATTGGTCAGCTGAAGCAGCTGTCCATCTTGAAGGTAGACCAGAATCGCCTCTGCGAGGTGACGGAGGCCATTGGGGACTGTGAGAACTTGTCAGAGCTGATCCTCACGGAGAATCTGCTGACGGCCCTGCCCCGCTCCTTGGGGAAGCTGAGCAAGCTGACCAACCTCAATGTGGACCGGAACCGCCTGGAGGCGCTACCGCCTGAGATTGGGGGCTGCGTGGCACTCAGCGTCCTCTCTTTGAGGGACAACCGCCTGGCTGTCCTGCCGCCGGAGCTCGCCCACACGGTCGAGCTGCATGTGCTGGATGTGGCCGGGAACCGTCTGCAGAGCCTGCCGTTCGCACTCACGCACCTCAACCTGAAGGCCCTGTGGCTGGCGGAGAACCAGGCGCAGCCCATGCTTCGGTTCCAGACTGAGGACGATGCCCAGACCGGCGAGAAGGTGCTCACCTGCTACCTGCTGCCCCAGCAGCCCCTGCCCAGCCTCGAGGACCCCGGGCCGCAGAGCAGCCCTTCGGAGAGCTGGGGTGACGCCCCGCTCAGCCGCGTCAGCGTCATCCAGTTCCTGGAGGCCCCCGCGGGCGACGAGGACGCAGAGGAAGCCGCTGCCGAGAAACGGGGCCTGCAGCGTCGGGCTACGCCTCACCCCAGCGAGCTCAAGGTGATGAAGAGGGGTGTGGAGCGTCGAAGCGAAGCCGCCTCCTGCAGGCCCGACTCCGCACAGCGCTCACCCTCACCCCCGCCCTCGGAGGAGGAGAAGAGGCTGAGCACCGAGTCTGGCCTGAGTGCGGACTCGCACCTGTCTGCCAGCACAGCCTCCCAGGGTGAGCCCGAGGGCCCGCTGGCCGAGGTGGAGGGGCCGAGCCAGCAGGAATCCACGCCAACCGCCCAGGAGGAGGTCGTAGAGGAGATCTATGAGGAGCCCACAGTGCGCTTCGCGGAGGACACGCTGCTCCTGCCCAGGGAGGATGGCGAGAGCGAGGAGGGGCAGCTGGAGGGCCCCTGGCCCCTGCCGGGTGAGAGACAGAGGCTCATCCGCAAGGACACGCCCCACTACAAGAAGCACTTCAAGATCTCCAAGCTGCCCCAGCCCGAGGCCGTGGTGGCCCTGCTGCAGGGGACACAGCCAGATAGTGAGGGCCCGGTAGGGTCTGGGGGCTGGCACAATGGCCCCCACGTGCCCTGGGCTCCTCGAGCCGAGGAGGAGGAGGAGGAGGAAGACGAGGAGGAGGAGGAAGCAGCAGCAGGAGCCGAGGAGGCGGACGAGGAGGAGGAGGAGAGGGAGGAGGCCGTGGCCTCTGCACCCTCTGTCAAGGGGGTGTCGTTTGACCAGGCCAATAACCTGCTGATAGAGCCCGCTCGCATTGAGGAAGAAGAGCTGACGCTCACCATTGTGCGGCAGACGGGGGGCCTGGGCATCAGCATCGCGGGCGGCAAGGGCTCCACCCCCTACAAGGGCGACGACGAGGGCATATTCATCTCCCGGGTATCTGAGGAGGGCCCTGCGGCTCAGGCTGGGGTCCGAGTAGGTGACAAGCTCCTCGAGGTGAACGGCGTGGCCTTGCAGGACGCCGAGCACCAGCAGGCCGTGGAGGCGCTGCGTGGGGCGGGCGCCACTGTGCACATGCGCCTGTGGCGGGAGCGTATGGTGGAGCCCGAGAACGCGGTCACCGTCACGCCTCTGCGGCCTGAGGACGACTACAGCCCCCGGGAGCGGTGGGGAGGCGGCCTGCGCCTGCCCCTGCTCCAGCCCGAGCCCCCCGGGCCCCTCCGCCAGCGCCACGTGGCCTGCCTCGTGCGCAGCGAGAAGGGGTTGGGCTTCAGCATCGCTGGGGGGAAAGGCTCCACACCCTACCGGGCTGGAGACCCGGGTATCTTCATCTCCCGCATTGCTGAGGGGGGCGCCGCCCACCGGGCGGGCACCCTGCAGGTCGGCGATCGCGTCCTCTCCATCAACGGGGTGGACATGACGGAGGCCAGGCACGACCACGCTGTCTCCCTGCTGACCGCTGCCTCTCCCACCATCGCCCTGCTGCTGGAACGGGAGGCCGGGGGGCCACTTGCCCCCGGTCCTCCGCCACACTCCCCCCCACCCCCTGCTGCTACCACCACCACCGTGCCCACTGCCACCCCTGGGGAGCCCGGGCCGCTAAGGCTGGCCCCCAGTTTGCTGGCCGCTGCCCTGGAGGGGCCGTACCCAGTGGAGGAGATCTGTCTGCCGAGAGCTGGGGGCCCCTTGGGGCTCAGCATTGTCGGGGGCTCCGATCACTCCAGCCACCCATTTGGTGTCCAGGAGCCCGGCGTGTTCATCTCTAAGGTGCTCCCCCGGGGCCTGGCTGCACGCAGTGGCCTGCGGGTTGGGGACCGCATCCTGGGAGTGAATGGGCAGGATGTGCGGGACGCCACCCACCAGGAAGCGGTCAGCGCCCTGCTCCGGCCCTGCCTGGAGCTGGTCCTGCTCGTGCGGAGGGACCCGCCGCCCCCGGGCATGCGGGAGCTCTGTATCCAGAAGGCCCCTGGAGAGAAGCTGGGCATCAGCATCCGTGGGGGCGCCAAAGGCCACGCAGGGAACCCCTGTGACCCCACGGACGAGGGCATCTTCATCTCCAAGGTGAGCCCCACAGGAGCAGCCGGGCGAGATGGCCGCCTGCGGGTGGGGCTGCGGCTGCTGGAGGTGAACCAGCAGAGCTTGCTAGGCCTGACGCACGGCGAAGCCGTGCAGCTGCTACGCAGCGTGGGCGACACCCTGACCGTGCTTGTCTGTGACGGCTTCGACACCAGTGCCCCCGAGGTGTCCCCAGGCGTCATCGCCAACCCCTTTGCAGCGGGCATTGGCCGCCGGAACAGCCTGGAAAGCATCTCCTCCATCGACCGGGAGCTGAGCCCCGAGGGCCCCGGCAAGGAGAAGGAGCTGCCTGGACAGACCCCACAGAGGGGGCCGGAGGCCGTGGGTTGGAGCCTGGAGAGCCTGAAGCTGGACTGCCGTGCCCTGGCCGCCACACCCAGCGCCGGCAGTGTGCAGAGGGTCAGTCCCTGA

Related Sequences

bmy_07591T0 Protein

Length: 1274 aa      View alignments
>bmy_07591T0
MLKCIPLWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLSKLTNLNVDRNRLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTVELHVLDVAGNRLQSLPFALTHLNLKALWLAENQAQPMLRFQTEDDAQTGEKVLTCYLLPQQPLPSLEDPGPQSSPSESWGDAPLSRVSVIQFLEAPAGDEDAEEAAAEKRGLQRRATPHPSELKVMKRGVERRSEAASCRPDSAQRSPSPPPSEEEKRLSTESGLSADSHLSASTASQGEPEGPLAEVEGPSQQESTPTAQEEVVEEIYEEPTVRFAEDTLLLPREDGESEEGQLEGPWPLPGERQRLIRKDTPHYKKHFKISKLPQPEAVVALLQGTQPDSEGPVGSGGWHNGPHVPWAPRAEEEEEEEDEEEEEAAAGAEEADEEEEEREEAVASAPSVKGVSFDQANNLLIEPARIEEEELTLTIVRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAAQAGVRVGDKLLEVNGVALQDAEHQQAVEALRGAGATVHMRLWRERMVEPENAVTVTPLRPEDDYSPRERWGGGLRLPLLQPEPPGPLRQRHVACLVRSEKGLGFSIAGGKGSTPYRAGDPGIFISRIAEGGAAHRAGTLQVGDRVLSINGVDMTEARHDHAVSLLTAASPTIALLLEREAGGPLAPGPPPHSPPPPAATTTTVPTATPGEPGPLRLAPSLLAAALEGPYPVEEICLPRAGGPLGLSIVGGSDHSSHPFGVQEPGVFISKVLPRGLAARSGLRVGDRILGVNGQDVRDATHQEAVSALLRPCLELVLLVRRDPPPPGMRELCIQKAPGEKLGISIRGGAKGHAGNPCDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLVCDGFDTSAPEVSPGVIANPFAAGIGRRNSLESISSIDRELSPEGPGKEKELPGQTPQRGPEAVGWSLESLKLDCRALAATPSAGSVQRVSP*