Part of scaffold_314 (Scaffold)

For more information consult the page for scaffold_314 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TIGD5 ENSTTRG00000015171 (Bottlenosed dolphin)

Gene Details

tigger transposable element derived 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014382, Bottlenosed dolphin)

Protein Percentage 75.43%
cDNA percentage 77.45%
Ka/Ks Ratio 0.25297 (Ka = 0.0391, Ks = 0.1544)

TIGD5 ENSBTAG00000048160 (Cow)

Gene Details

Tigger transposable element-derived protein 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054451, Cow)

Protein Percentage 90.36%
cDNA percentage 89.88%
Ka/Ks Ratio 0.08276 (Ka = 0.0464, Ks = 0.5608)

TIGD5  (Minke Whale)

Gene Details

tigger transposable element derived 5

External Links

Gene match (Identifier: BACU020298, Minke Whale)

Protein Percentage 95.9%
cDNA percentage 97.51%
Ka/Ks Ratio 0.39097 (Ka = 0.0202, Ks = 0.0515)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1248 bp    Location:985116..979180   Strand:-
>bmy_07601
ATGGGGGCGAGAGGCCAGGGCGGCTACGGCGACGAGCAGATCTACAACGCCAACGTCACCGGCCTCTACTGGAAGCTGCTTCCGGAGCAGGCCGCGCCCCCGGGCGCGGGGGGCTGCGGCCGTCGCTGGCGGGGCGACCGGGTGACGGTGCTGCTGGCCGCCAACCTGACCGGCAGCCACAAACTGAAGCCGCTGGTCATCGGGCAGTTGCCCGACCCACCCAGCCTGCGCCACCACAACCAGGACAAGTTCCCCGCCTCCTACCGCTACAGCCCCGACGCCTGGCTCAGCCGCCCGCTGCTGCGCGGCTGGTTCTTCGAGGAGTTCGTCCCGGGCGTCAGGCGCTACCTGCGCCGCAGCTGCCTGGAGCAGAAGGCTGTGCTGCTGGTCGCCCACCCGCCCTGCCCCAGCCCTGCGGCCAGGGTGCCCGCCTTGGGGGAGAGCGAGGAGACCCCCAGGAGGTGCCGGCCTGAGCCCCTGGGCCCTCCGGAGGGGCTGCAGACCCCCGACGGGGCGGTGCGCGTGCTGTTCCTGTCCAAGGGCAGCAGCCGGGCGCACATCCCGGCCCCACTGGGGCAGGGGGTGGTGGCCGCCTTCAAGCAGCTGTACAAGCGGGAGCTGCTGCGGCTGGCCGTGTCCTGCGCCGCGGGGTCCCCGCTGGACTTCATGCGCAGCTTCATGCTCAAGGACATGCTCTACCTGGCCGGCCTCTCCTGGGACCTGGTGCAGGCAGGCAGCATCGAGCGCTGCTGGCTGCTGGGCTTGCGGGCTGCCTCTGAGCCCCGGCCGGCGGAGGAGTGCGCTGCGCAGCCAGCTGGCCGGGCCGAGGAGGCCGCGGAGCGCAGCAGGGTGCTTAGCGACCTCACGCACCTGGCAGCCCTGGCCTACAAGCGGCTGGCGCCCGAGGAGGTGGCCGAGTGGCTGCACCTGGACGATGACGGGGGGCTGCCCGACGGCTGCAGAGAGGACCCGGGCCCCAGCCGGCCTCCTGTGCTGGTCCCTGGGGCCCCTCCGCCCCCAGCCAGCCTGCCCTCTGTCGCGGCGGGAGGAGAGGAGGAGGAGGAGGCCGCCGTGCCCTCCGCTGGGGAGGCCGTGCGGGGTCTGGAGACAGCTCTGCGATGGCTGGAGAGCCGGGACCCCCGGGAGGTAGGGCCGCTGAAGCTGGTGCAGCTTCGCTCACTGATCAGCATGGCCCGGAGGCTGGGGGGCATCGGGCCCTCTCCTGCAGTCCCTGATGATGGGGTGTGA

Related Sequences

bmy_07601T0 Protein

Length: 416 aa      View alignments
>bmy_07601T0
MGARGQGGYGDEQIYNANVTGLYWKLLPEQAAPPGAGGCGRRWRGDRVTVLLAANLTGSHKLKPLVIGQLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVRRYLRRSCLEQKAVLLVAHPPCPSPAARVPALGESEETPRRCRPEPLGPPEGLQTPDGAVRVLFLSKGSSRAHIPAPLGQGVVAAFKQLYKRELLRLAVSCAAGSPLDFMRSFMLKDMLYLAGLSWDLVQAGSIERCWLLGLRAASEPRPAEECAAQPAGRAEEAAERSRVLSDLTHLAALAYKRLAPEEVAEWLHLDDDGGLPDGCREDPGPSRPPVLVPGAPPPPASLPSVAAGGEEEEEAAVPSAGEAVRGLETALRWLESRDPREVGPLKLVQLRSLISMARRLGGIGPSPAVPDDGV*