Sequence detailsbmy_07605 (Coding sequence)

Part of scaffold_314 (SequenceType object (1))

For more information consult the page for scaffold_314 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GSDMDENSTTRG00000015127 (Bottlenosed dolphin)

Gene Details

gasdermin D

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014342, Bottlenosed dolphin)

Protein Percentage 73.93%
cDNA percentage 79.94%
Ka/Ks Ratio 0.44303 (Ka = 0.2006, Ks = 0.4528)

GSDMDENSBTAG00000021474 (Cow)

Gene Details

gasdermin-D

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028627, Cow)

Protein Percentage 82.18%
cDNA percentage 87.36%
Ka/Ks Ratio 0.23557 (Ka = 0.0937, Ks = 0.3977)

GSDMD (Minke Whale)

Gene Details

gasdermin D

External Links

Gene match (Identifier: BACU001482, Minke Whale)

Protein Percentage 96.85%
cDNA percentage 98.19%
Ka/Ks Ratio 0.33176 (Ka = 0.0135, Ks = 0.0406)

Additional orthologs identified in other species via the OPTIC pipeline.

GSDMD (Human)   Gsdmd (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1224 bp    Location:1016196..1011368   Strand:-
Raw sequence 
>bmy_07605
CACTTTTGGATCTGGGGACCTTTGGGCTGTGTGCTCGCTCGGCAGCTCCGGGGCAGAGCCCTCCGATCCCAGCCAGCAGAGCGGCCTGGCTTCAGCTTTGTGGGCGCGGGCACGCAACAGTCACGGTCACGCCCTGCGGGTGCAAGGCCTGACCCAGCTGCCCGCCTCAGGAGCATGGCATCGGCCTTTGCGAGGGTGGTCAAGAGCGTGGTCCGGGAGCTGGACCACAGTGGAGAGCTCACCCCTGTGGACAGCCTGCAGAGCTCCACCAGCTTCCAGCTCTACTGCCTTTTGGGCAGGAGGTCCTCGAGTTCACGGTTCTGGAGACACCGCTACACACGTGTCAACCTGTCCATCAGGGACATCCTGGAGCCCGACGCCCCGGAGCCAGCTGTGGAGCGTGGCAGCACCTTCCATTTCCACGATGCTATGGATGGGCAGCTGCAGGGCAGCGTGGAGCTGGCGGCCCCAGGTCAGGGGAAGTTGTCAGGTGGGGCCGCGGTGTCGGGCAGCTCCAGCGCCTCGATGAACGTGTGCATGCTGCGAGTGGCCCCCAACACCTGGGAAGCCATGCATCGAGAGAGGCGCTTGCGGCAGCCTGAGCACAAAATCCTGCAACAGCTGCGGAATCGTGGGGATGACGTGTTCGTCGTGACCGAGGTGCTGCAGACACAGAAGGAGGTGGAAGTCACCCGGACCCAAAAGCAGGAGGGCTCAGGCCAGTTTGCATTTCCGGGAGCCATGTGCTTGCAGGGCAGAGGCGAGGGCCACCTGAGCCAGAAGAAGATGGTCACCATCCCCTCGGGCAGCATCCTCGCATTTCGGGTGGCCCAGCTGGTTATTGGCTCTGACTGGGACATCCTCTTCTTCCCGGACAAGAAGCAGACGACCTTCAGGCCACAGCAGGAAGTGCTGAGTGCAACCCAGCACGTGCTGCTGGCTGAGGTGCTGGAGATGGGGGCCCTGTCGGGGGCGTTCAAACTGGTGGAGAGCCTTTTGGAGCAGAGCACCCCATGGCAGGAGCGCAGGGCCGTGTCCCTGCCGCCCGAGCTCCTGGGGAGCAGCTGGGACTCAGAGGCACCCACCTGGGTCCTGCTGGAGGAGTGCGGCCTTGAGCCACAGGTGGGCGCCCCCCAGGTGTGCTGGAAACCGGAGGCCCAGGGCTGTGCGTATGCGCTTTACGCCTGCCTGGCACTGCTATTCAGGCTGAGCCGGCTCTGCTAG

Related Sequences

bmy_07605T0 SequenceType object (3)

Length: 408 aa      View alignments
>bmy_07605T0
HFWIWGPLGCVLARQLRGRALRSQPAERPGFSFVGAGTQQSRSRPAGARPDPAARLRSMASAFARVVKSVVRELDHSGELTPVDSLQSSTSFQLYCLLGRRSSSSRFWRHRYTRVNLSIRDILEPDAPEPAVERGSTFHFHDAMDGQLQGSVELAAPGQGKLSGGAAVSGSSSASMNVCMLRVAPNTWEAMHRERRLRQPEHKILQQLRNRGDDVFVVTEVLQTQKEVEVTRTQKQEGSGQFAFPGAMCLQGRGEGHLSQKKMVTIPSGSILAFRVAQLVIGSDWDILFFPDKKQTTFRPQQEVLSATQHVLLAEVLEMGALSGAFKLVESLLEQSTPWQERRAVSLPPELLGSSWDSEAPTWVLLEECGLEPQVGAPQVCWKPEAQGCAYALYACLALLFRLSRLC*