Part of scaffold_314 (Scaffold)

For more information consult the page for scaffold_314 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RHPN1 ENSTTRG00000004340 (Bottlenosed dolphin)

Gene Details

rhophilin, Rho GTPase binding protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004095, Bottlenosed dolphin)

Protein Percentage 68.84%
cDNA percentage 69.9%
Ka/Ks Ratio 0.21623 (Ka = 0.049, Ks = 0.2265)

RHPN1 ENSBTAG00000002104 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002715, Cow)

Protein Percentage 82.23%
cDNA percentage 87.21%
Ka/Ks Ratio 0.18462 (Ka = 0.0906, Ks = 0.491)

RHPN1  (Minke Whale)

Gene Details

rhophilin, Rho GTPase binding protein 1

External Links

Gene match (Identifier: BACU001484, Minke Whale)

Protein Percentage 87.95%
cDNA percentage 91.8%
Ka/Ks Ratio 0.37375 (Ka = 0.0695, Ks = 0.1859)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2394 bp    Location:1174492..1156190   Strand:-
>bmy_07608
ATGAGGACAACCCAGGCCCTAAGGCAGATATCTGGGTTCCAGGGCGGCCCCCGGCGGGGACTGGAGCCCGGGCACCGAGGGATTTGCGTGTGTCGGCGCCGGTCCACGCCCATCTCCTASGGAGCTGGTCAGGCACAGGAGGCCCCGCGGGCCACGCTGGGTCGTGCGGAGAAGRGGAGACCGGGGAGAGTGTCCCCCTCCGGACCCCACCCGCCGCGCGCTCCGGAACTCCCACCTGCGGCTCCTCGAGGCCTCGGGCTCCGCAGCGAGCGTACCGTCTACCGACGCGCCCTCTCCTGCCATCAAGTCCGCGCGTGCGCAGCGCCTCCACCACCACCACGTGCCGCGCCTCGGCGCCGCGGGGGCCGCCGGGAAGGCAGAAGGCGCAAGCGCGGGGCGGGGCTCCTGCGCGGCCCGGCAGCTGGGGGTCTGGGGCGCGAACTCCTCGACGCAGGCGGCGCGGGAGGTGGGCACTGGCAGGGTGGGTGGGAGCGACGAGGGGGCAGCCCAGGGTCCAGGGCCCCGCGGGAGATCTTGGCGCAAGGCTGTGACCTCCTGGCAAATTCGCAGCACGGCTGCCTGCAGAGCCGCAGGGCCCGGATCCACCAGCAGATCAACAGGGAGCTGAGGATGCGGACGGGCGCCGAGAACCTGTACAGAGCCACCAGCAACGCCCGGGTCAGGGAGACTGTGGCCCTGGAGCTGAGCTACGTCAACTCCAGCCTGCAGCTGCTGAAGGAGGAGCTGGAGGGGCTCGATGGCAACGTGGACGCCGACCAGCCCCAGAGGTGCGAGCTGATCTCAGGGCACTTTGGAGAGGACAGTGCTTCCTACGAGGCTGAAATCCAGGAGCTGGAGGACCTGCGGCAGGCCACGCGGACCCCCAGCCGGAGCGAGGCGGGCCTGGAGCTGCTCACGGCCTACTACAATCAGCTGTGTTTCCAGGAGGCGCGCTTTGTCACCCCTGCCAGGAGCCTGGGGCTGCTGTTCCACTGGTACGACTCGCTGACGGGGGTTCCGGCCCAGCAGCGGGCCCTGGCCTTCGAGAAGGGCAGCGTGCTCTTCAACATCGGCGCCCTCCACACCCAGATCGGGGCTCGCCAGGACCGCTCCTGCCCCGAGGGCACCAGCTGTGCTGTGGAGGCCTTTCAGAGGGCTGTGGGGGCCTTCAGCTTCCTGAGGGAGAACTTCTCCCACGCGCCCAGCCCCGACATGAGCCCCGCCTCACTCTCCATGCTGGAGCAGCTCATGACCGCCCAGGCCCAGGAGTGCGTCTTCGAGGGCCTCTCGCTGCAGGCCCCCGTGGCCCCCCATGACTGCCTGGCCCAGCTGCACCTGGCTCAGGAGGCCGCCCAGGTGGCGGCCGAGTACCGGCTGGTGCACCAGACCATGACCCAGCCGCCCGTCCAGGACTACGTGCCCTTCCCCTGGACCACCCTGGTGCACGTGAAGGCCGAGTACTTCCGCGCCCTGGCCCACTACCACGCGGCCCTGGCCCTGTGTGACGGCGCCCCGGTGGCAGAGGCGGAGCTTCCAGCCCTTGAGCAGATCTTCCTCGGGTTCCCGGCCTCGTCTGAGCCCCGGGGCCCCGCACTGCCCCAGGAGCACGAGGAGCGCCGGAAGCTGGGCAAGGCCCACCTGAAGCGGGCCGTCCTGGGTCAGGAGGAGGCTCTGCGGCTGCATGCCGTGTGCCGGGCCCTGCGCAGCGTGGACCTGCTGCAGGGCGTGCTGACCCAGGCGCTGCGGCGCTCTCTGGCCAAGTACTCGGAACTCGACCTCGAGGACGACTTCTGTGAGGCCGCCGAGGCCCCTGACGTTCGGCGTGAGCAGCCAGGCCCCTTGGCTAAGACGCAGCGGAGGCTGGAGGGCAGGGCACCCAGCTTCTCCCGGGTGAAGGTGGCTGATATCTTCCATCGGCTGGGGCCCCTGTCCGTGTTCTCAGCCAAGAACCGCTGGCGGCTGGCAGGGCCCATCCACGTGGCCCGAGGAGAGGGGGGCTTCGGCTTCACGCTGCGGGGAGACGCGCCCGTTCTCATCGCTGCCGTCGTTCCAGGGAGCCGGGCCGCGGCGGCCGGCCTGAAGCAGGGTGACTACATCGTGTCGGTGAACGGGCAGCCGTGCAGGTGGTGGAAGCACGCAGACGTGGTAGCCCAGCTGAAGCGCGTGGGCGACGCGGGCGTGAGCCTGCAGGTGCTGACGCTGCTGCCCAGTGCCGAGCCGCCTGGCTCGGGGGACCGCCGGCCAGCCCTGGGGGGGCTTCTGAGGAGCCAGAAGGAGTGTGGCTGGGAGACACCAGAGCCCGCGCAGGCCAGCCCCAGGCCCCTCCTTGGCTGGAACCGTAAGGCCAAGAGGGGCAAGACTGGCAGGAGGCTGTCCCCGGCGCCACACCCCTGA

Related Sequences

bmy_07608T0 Protein

Length: 798 aa      View alignments
>bmy_07608T0
MRTTQALRQISGFQGGPRRGLEPGHRGICVCRRRSTPISXGAGQAQEAPRATLGRAEKXRPGRVSPSGPHPPRAPELPPAAPRGLGLRSERTVYRRALSCHQVRACAAPPPPPRAAPRRRGGRREGRRRKRGAGLLRGPAAGGLGRELLDAGGAGGGHWQGGWERRGGSPGSRAPREILAQGCDLLANSQHGCLQSRRARIHQQINRELRMRTGAENLYRATSNARVRETVALELSYVNSSLQLLKEELEGLDGNVDADQPQRCELISGHFGEDSASYEAEIQELEDLRQATRTPSRSEAGLELLTAYYNQLCFQEARFVTPARSLGLLFHWYDSLTGVPAQQRALAFEKGSVLFNIGALHTQIGARQDRSCPEGTSCAVEAFQRAVGAFSFLRENFSHAPSPDMSPASLSMLEQLMTAQAQECVFEGLSLQAPVAPHDCLAQLHLAQEAAQVAAEYRLVHQTMTQPPVQDYVPFPWTTLVHVKAEYFRALAHYHAALALCDGAPVAEAELPALEQIFLGFPASSEPRGPALPQEHEERRKLGKAHLKRAVLGQEEALRLHAVCRALRSVDLLQGVLTQALRRSLAKYSELDLEDDFCEAAEAPDVRREQPGPLAKTQRRLEGRAPSFSRVKVADIFHRLGPLSVFSAKNRWRLAGPIHVARGEGGFGFTLRGDAPVLIAAVVPGSRAAAAGLKQGDYIVSVNGQPCRWWKHADVVAQLKRVGDAGVSLQVLTLLPSAEPPGSGDRRPALGGLLRSQKECGWETPEPAQASPRPLLGWNRKAKRGKTGRRLSPAPHP*