Part of scaffold_313 (Scaffold)

For more information consult the page for scaffold_313 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM59 ENSTTRG00000000078 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 59

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000070, Bottlenosed dolphin)

Protein Percentage 97.76%
cDNA percentage 98.09%
Ka/Ks Ratio 0.21702 (Ka = 0.0103, Ks = 0.0473)

MGC137058 ENSBTAG00000008078 (Cow)

Gene Details

tripartite motif-containing protein 59

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010623, Cow)

Protein Percentage 94.18%
cDNA percentage 94.74%
Ka/Ks Ratio 0.1758 (Ka = 0.0276, Ks = 0.157)

TRIM59  (Minke Whale)

Gene Details

tripartite motif containing 59

External Links

Gene match (Identifier: BACU012267, Minke Whale)

Protein Percentage 99.0%
cDNA percentage 99.17%
Ka/Ks Ratio 0.26198 (Ka = 0.0047, Ks = 0.0179)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1359 bp    Location:432107..420919   Strand:-
>bmy_07624
GGAGGCTCTCAAGCCCCGCCTCATCTGGGAACCCGAAGGCCCTCAGGGCGGAGGAGGGAGGGCGGGAATCCGAGCAGCTCTCAGCGTCAGCCCGCAGGCTGTGGAGCTCTGTTTCTGCTGGTGGAGTTGGCTGGTTTTCCCGTCCCCACGATGCACAATTTTGAGGATGAGTTAACATGTCCCATTTGTTACAGTATTTTTGAAGATCCTCGTGTACTACCATGCTCTCATACATTTTGTAGAAATTGCTTGGAAAATGTTCTACAGGCATCTGGTAACTTTTATATATGGAGACCTTTACGCATTCCACTCAAGTGCCCTAACTGCAGAAGCATTATTGAAATTGCTCCAACTGGTATTGAATCTTTACCTGTTAATTTTGCGTTAAGGGCTATTATTGAAAAGTACCAGCAAGAAGACCATCCAGATATTGTCACCTGCCCTGAACATTACAGGCAGCCGTTAAATGTTTACTGTCTCCTGGATAAAAAATTAGTTTGTGGTCATTGCCTTACCATAGGTCAACATCATGGTCATCCTATAGATGACCTTCAAAGTGCCTATATGAAAGAAAAGGACACGCCTGAAAAACTGCTTGAACAGTTAACTGACACACACTGGACAGATCTTACTCGTCTTATTGAAAGGCTGGAAGAACAAAAATCTCATTCGGAGAAAATGGTCCAAGGTGATAAGGAAGTTGTTCTCCAGTATTTTAAGGAGCTTAGTGATACATTAGAACAGAAAAAAAATTTTTTCCTAACTGCTCTTTGTGATGTTGGCAATCTGATTAATCTAGAATATACTCCACAAATTGAAAGAATGAAAGAAATAAGAGAGCAGCAGCTTGAATTAGTGACACTGACAACATCTTTACAAGAAGAGCCTCCACTTAAATTTCTTGAAAAAGTTGATGATGTCCGCCAACGTGTGCAGGTCTTGAAACAAAGACCACTCCCTGAGGTCCAACCTGTTGAAATTCATCCTCGAGTAAGCCAAGTACTGAAAGAAGAATGGAGCAGAACAGAAATTGGACAAATAAAGAAACTTCTCATTCCTGAAATGAAAATTTCTTCAGAAAGGATGCCATGTTCCTGGCCTGATAAGGAGGAAAAAGAAGTTGAATTTTTTAAGATTCTGAACATTGTTATAGTTACACTAATTTCAGTGATGTTGACGCTGATCCTCTTTTTTAACCAACACATAATGACCTTTTTAAATGAAATCACTTCAATATGTTTTTCTGAAGCCTCTCTATCTGTTTACCAAAGTTTACATAAGAATGTGCATGATTTAAAGAATATACTATGTCACACTTTATATTTACTGAAGGAATTCATGTGGAAAATAATTTGTTGA

Related Sequences

bmy_07624T0 Protein

Length: 453 aa      View alignments
>bmy_07624T0
GGSQAPPHLGTRRPSGRRREGGNPSSSQRQPAGCGALFLLVELAGFPVPTMHNFEDELTCPICYSIFEDPRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCPNCRSIIEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHCLTIGQHHGHPIDDLQSAYMKEKDTPEKLLEQLTDTHWTDLTRLIERLEEQKSHSEKMVQGDKEVVLQYFKELSDTLEQKKNFFLTALCDVGNLINLEYTPQIERMKEIREQQLELVTLTTSLQEEPPLKFLEKVDDVRQRVQVLKQRPLPEVQPVEIHPRVSQVLKEEWSRTEIGQIKKLLIPEMKISSERMPCSWPDKEEKEVEFFKILNIVIVTLISVMLTLILFFNQHIMTFLNEITSICFSEASLSVYQSLHKNVHDLKNILCHTLYLLKEFMWKIIC*