Sequence detailsbmy_07627 (Coding sequence)

Part of scaffold_313 (SequenceType object (1))

For more information consult the page for scaffold_313 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPM1LENSTTRG00000016801 (Bottlenosed dolphin)

Gene Details

protein phosphatase, Mg2+/Mn2+ dependent, 1L

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015928, Bottlenosed dolphin)

Protein Percentage 42.63%
cDNA percentage 45.26%
Ka/Ks Ratio 0.48361 (Ka = 0.1532, Ks = 0.3168)

PPM1LENSBTAG00000001274 (Cow)

Gene Details

Protein phosphatase 1L

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000050151, Cow)

Protein Percentage 89.58%
cDNA percentage 88.54%
Ka/Ks Ratio 0.22868 (Ka = 0.0748, Ks = 0.3273)

Additional orthologs identified in other species via the OPTIC pipeline.

PPM1L (Human)   Ppm1l (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 579 bp    Location:984090..1022952   Strand:+
Raw sequence 
>bmy_07627
ATGAATCATTGCGTAGAAGGAGAGCAGGTTGCGGAGGAAGCAGATTTGGTGTTTAGGCCTGCATTTCCCTGCACAACGTGTTTGATTGCTCTGTTGTCAGATAAAGACCTCACCGTGGCCAATGTGGGTGACTCGCGTGGGGTGCTGTGTGACAAGGACGGGAATGCCATTCCTTTGTCTCATGATCACAAGCCGTACCAGCTGAAGGAAAGGAAGAGGATAAAGAGAGCCGGTGGTTTCATCAGTTTCAATGGCTCCTGGAGGGTCCAGGGAATCCTGGCCATGTCTCGATCCCTGGGGGATTATCCGCTGAAAAATCTCAACGTGGTCATCCCAGACCCAGATATCCTGACCTTTGACCTGGACAAGCTCCAGCCCGAGTTCATGATCTTGGCATCAGATGGCCTCTGGGATGCTTTCAGCAATGAAGAAGCTGTTCGATTCATCAAGGACCGCTTGGATGAACCTCACTTTGGGGCCAAGAGCATAGTTTTACAGTCATTTTACAGAGGCTGCCCTGACAACATAACAGTCATGGTGGTGAAGTTCAGGAATAGCAGCAAAACAGAAGAGCAGTGA

Related Sequences

bmy_07627T0 SequenceType object (3)

Length: 193 aa      View alignments
>bmy_07627T0
MNHCVEGEQVAEEADLVFRPAFPCTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPDPDILTFDLDKLQPEFMILASDGLWDAFSNEEAVRFIKDRLDEPHFGAKSIVLQSFYRGCPDNITVMVVKFRNSSKTEEQ*