Sequence details bmy_07628 (Coding sequence)

Part of scaffold_313 (Scaffold)

For more information consult the page for scaffold_313 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

B3GALNT1 ENSTTRG00000016804 (Bottlenosed dolphin)

Gene Details

beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015930, Bottlenosed dolphin)

Protein Percentage 69.79%
cDNA percentage 68.38%
Ka/Ks Ratio 0.12081 (Ka = 0.0069, Ks = 0.0572)

BT.30969 ENSBTAG00000046104 (Cow)

Gene Details

UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000056523, Cow)

Protein Percentage 96.98%
cDNA percentage 95.17%
Ka/Ks Ratio 0.05415 (Ka = 0.0086, Ks = 0.1584)

B3GALNT1  (Minke Whale)

Gene Details

beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)

External Links

Gene match (Identifier: BACU012274, Minke Whale)

Protein Percentage 97.89%
cDNA percentage 98.79%
Ka/Ks Ratio 0.19073 (Ka = 0.0039, Ks = 0.0205)

Additional orthologs identified in other species via the OPTIC pipeline.

B3GALNT1 (Human)   B3galnt1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 996 bp    Location:1043803..1038112   Strand:-
Raw sequence 
>bmy_07628
ATGGCCCCGGCACGCCTGACCACCCTTCCGGGTAGGATGTCACTGAGATCCCTGAAATGGAGCCTCCTGCTGCTGTCGCTCCTGAGCTTCCTGGTGATGTGGTACCTCAGTCTTCCCCACTACAATGTGGTAGAACGCGTGAACTYGATGTACTTCTATGAGTATGAGCCCCTTTACAGACAAGACTTCCRCTTCACACTTCGAGAGCATTCGAACTGCTCTCATCAAAACCCATTTCTGGTCATCCTGGTGACCTCACACCCCTCAGATGTGAAAGCCAGACAGGCCATTAGAGTTACTTGGGGTGAAAAGAAGTCTTGGTGGGGATATGAGGTTCTTAYATTTTTCTTATTAGGCCAACAGGCTGAAAGGGAAGACAAAGTGTTAGCATTATCCTTAGAGGATGAACACCTCCTTTATGGCGACATAATACGACAAGATTTTTTAGACACGTACAATAACCTGACCTTGAAAACAATCATGGCATTTAGGTGGGTAACTGAGTTTTGCCCCAACGCCAGGTACATCATGAAGACAGACACTGATGTTTTCATCAATACTGGCAATTTAGTGAAGTATCTTTTAAATTTAAACCACTCAGAAAAGTTTTTCACAGGTTATCCTCTAATTGATAATTATTCTTATAGAGGATTTTACCAAAAAACCCATATTTCATACCAGGAGTATCCCTTCAAGGTGTTTCCTCCCTACTGCAGTGGGTTGGGTTATATAATGTCCAGAGATTTGGTGCCAAGAATCTATGAAATGATGAGTCACGTAAAACCCATCAAGTTTGAAGATGTTTATGTTGGGATCTGTTTGAATTTATTAAAAGTGGACATTCATATTCCRGAAGACACCAACCTTTTCTTTTTATATAGGATCCATTTGGATGTCTGTCAACTCAGACGCRTGATTGCAGCCCATGGCTTTTCTTCCAAGGAAATTATCACATTTTGGCAGGTTATGCTAAGGAACACCACATGCCATTATTAA

Related Sequences

bmy_07628T0 Protein

Length: 332 aa      View alignments
>bmy_07628T0
MAPARLTTLPGRMSLRSLKWSLLLLSLLSFLVMWYLSLPHYNVVERVNXMYFYEYEPLYRQDFXFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLXFFLLGQQAEREDKVLALSLEDEHLLYGDIIRQDFLDTYNNLTLKTIMAFRWVTEFCPNARYIMKTDTDVFINTGNLVKYLLNLNHSEKFFTGYPLIDNYSYRGFYQKTHISYQEYPFKVFPPYCSGLGYIMSRDLVPRIYEMMSHVKPIKFEDVYVGICLNLLKVDIHIPEDTNLFFLYRIHLDVCQLRRXIAAHGFSSKEIITFWQVMLRNTTCHY*