Part of scaffold_322 (Scaffold)

For more information consult the page for scaffold_322 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CIR1 ENSTTRG00000017000 (Bottlenosed dolphin)

Gene Details

corepressor interacting with RBPJ, 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016117, Bottlenosed dolphin)

Protein Percentage 86.05%
cDNA percentage 89.15%
Ka/Ks Ratio 0.58419 (Ka = 0.0524, Ks = 0.0897)

CIR1 ENSBTAG00000038620 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000049799, Cow)

Protein Percentage 78.93%
cDNA percentage 85.82%
Ka/Ks Ratio 0.44282 (Ka = 0.1274, Ks = 0.2878)

CIR1  (Minke Whale)

Gene Details

corepressor interacting with RBPJ, 1

External Links

Gene match (Identifier: BACU010136, Minke Whale)

Protein Percentage 91.8%
cDNA percentage 93.88%
Ka/Ks Ratio 0.47195 (Ka = 0.0542, Ks = 0.1148)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 921 bp    Location:258153..262005   Strand:+
>bmy_07635
ATGAAACTGGAATATACAAAAGAAGGAGGAAAGAATCTTTCCTATCTTATCTTCAGCTGCATTCCTACTGTGGAGTCCGAAAAAGGACCATCGATGCACCCCTCGGAGCTAATAGCGGAGATGAGAAACAGTGGGTTTGCACTGAAACGAAACGTACTGGGGAGAAACTTGACCGCAAATGATCCATCACAGGAATATGTTGCAAGTGAGGGTGAAGAAGATCCAGAAGTCGAATTTTTAAAGTCACTAACAACCAAACAAAAACAGAAACTTCTCAGGAAATTGGATCGACTTGAGAAGAAAAAAAAGAAAAGGAGAAAAGATAGAAAAAAGAAAAAGCTTCAGAAGAGCAGAAGTAAACACAAAAAACATAAAAACAAATCCTCCTCCTCTTCGTCTTCCTCCTCTGGTGACACTTCAGAAAGCAGCAGTGAGAGTGACAACAAAGAAAAAAAAATACAGAAGAAGAAAAGAAAGAAAAACAGGCGTTCAGGGAATTACAACAGTGGTTCTGAAGAGACGGACAAGTCTAAGAAGAGAAAACTTGATGAAGAACTTTCTAGCAGTCACAGTAACAAGGAAAAGCCTAGGTTTTTAAAACAAGAGAGTTCTGGGGAGAAGAGCAAATGGAGCCATTCTGATTCTGACAGAAAGCCCAGAAACCATAACCAGAGTCCAGAGGAGAGCGGATCTGGAAGAAATGAGAGGAGCAGGAGAAGCCGAAGCAGAAGTCATGGTGGTTACAAGCCAAGAGAAATGAGAAAACGGCCACGGCGAAGTCCCAGTGAAGAGCGGGACAGGAGAAACAACACCAGAAGCCATGGCACAGATAGATACAGAGGAGGGAAAATGCACGGAGCATTATCAGGAGATGATAGGCATACTAGAGTGATGCAAAGAGAATGGAGAAGTAGAGAATAA

Related Sequences

bmy_07635T0 Protein

Length: 307 aa      View alignments
>bmy_07635T0
MKLEYTKEGGKNLSYLIFSCIPTVESEKGPSMHPSELIAEMRNSGFALKRNVLGRNLTANDPSQEYVASEGEEDPEVEFLKSLTTKQKQKLLRKLDRLEKKKKKRRKDRKKKKLQKSRSKHKKHKNKSSSSSSSSSGDTSESSSESDNKEKKIQKKKRKKNRRSGNYNSGSEETDKSKKRKLDEELSSSHSNKEKPRFLKQESSGEKSKWSHSDSDRKPRNHNQSPEESGSGRNERSRRSRSRSHGGYKPREMRKRPRRSPSEERDRRNNTRSHGTDRYRGGKMHGALSGDDRHTRVMQREWRSRE*