Sequence detailsbmy_07660 (Coding sequence)

Part of scaffold_321 (SequenceType object (1))

For more information consult the page for scaffold_321 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VPS16ENSTTRG00000003465 (Bottlenosed dolphin)

Gene Details

vacuolar protein sorting 16 homolog (S. cerevisiae)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003250, Bottlenosed dolphin)

Protein Percentage 93.94%
cDNA percentage 94.1%
Ka/Ks Ratio 0.28865 (Ka = 0.0192, Ks = 0.0667)

VPS16ENSBTAG00000001320 (Cow)

Gene Details

vacuolar protein sorting-associated protein 16 homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001744, Cow)

Protein Percentage 96.9%
cDNA percentage 93.17%
Ka/Ks Ratio 0.07804 (Ka = 0.0198, Ks = 0.2534)

Additional orthologs identified in other species via the OPTIC pipeline.

VPS16 (Human)   Vps16 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2793 bp    Location:364292..372204   Strand:+
Raw sequence 
>bmy_07660
ATGGAGGCATTAGGGGCTCCTCTGGGGCTCAGCCCATCTGGATGCAGGGTCATGACGAGTCTAATCTCTGTTTGTCACTGTGTGGGCAGGAAATATGAGCTGTATAGCATGGACTGGGACCTGAAGGAGGAACTGAGGGACTGCCTGGTGGCCGCCGCGCCCTATGGGGGCCCCATTGCGCTGCTGAGGAACCCCGGGCGGAAGGAGAAGCCTGCCTGCGCACGGCCGGTTCTCGAGATCTACTCGGCTTCTGGTGTGCCTCTGGCCAGTCTGCTGTGGAAGAGTGGGCCCATGGTGTCCCTGGGCTGGTCAGCTGAGGAGGAGCTGCTCTGTGTGCAGGAAGACGGGGTCGTGCTGGTTTATGGGCTTCATGGTGACTTCCGGAGACACTTCAGCATGGGCAACGAGGTGCTCCAGAACCGGGTTCTAGATGCCCGGATCTTCCATACTGAGTTTGGTTCTGGGGTGGCCATCCTCACAGGGGCCCACCGCTTCACCCTCAGTGCCAATGTGGGCGACCTCAAACTCCGCCGGATGCCAGAGGTGCCAGGTCTGCAGAGTGCACCCTCATGCTGGACCACAGTGTGCCAGGACCGAGTGGCACACATTCTTCTGGCTGTAGGACCTGATCTTTACCTCCTGGATCACGCAGCCTGCTCTTCAGTGATACCCCCTGGCCTAGCCCCAGGAGTGAGCAGCTTCCTGCAGATGGCTGTCTCCTTCACCTACAGACACCTGGCGCTCTTCACAGACACAGGGTACATCTGGATGGGGACAGCGTCTCTCAAGGAGAAGCTGTGTGAGTTCAACTGCAACATCCGGGCTCCCCCGAAGCAGATGGTCTGGTGCAGCCGTCCTCGCAGCAAGGAGAGGGCCATTGTGGTAGCCTGGGAGAGGCGGCTAATGGTGGTGGGTGACGCACCTGAGGGCATCCAGTATCCTTGGAGGGCTGCTGGGGGTGAGGAGGGGGAAGGAGGGTCGCCTGCCCTGCCCCATCTCTGGGTGCTCTTAGGAACCTTGACCAAGCTCAGGTTCGTGCTGGATGAGGACTCCTACCTGGTGCCTGAGCTGGATGGGGTCCGCATCTTCTCCCGCAGTACCCATGAGTTCTTGCACGAGGTTCCAGTGGCCAGCGAGGAGATCTTTAAAATTGCCTCAATGGCCCCTGGAGCACTACTGTTGGAGGCCCAGAAGGAATATGAGAAAGAGAGCCAGAAGGCGGATGAGTACCTGCGGGAGATCCAGGAGCTGGGGCAGCTGCCCCAGGCCGTGCAGCAGTGCATCGAGGCAGCGGGACATGAGCACTGGCCAGACATGCAGAAGAGTCTGCTCAGGGCGGCCTCCTTTGGAAAGTGTTTCCTGGACAGATTTCCACCCGACAGCTTTGTGCGCATGTGTCAGGACCTTCGTGTACTCAATGCCATTCGGGACTATCACATCGGGATTCCCCTCACCTATAGCCAGTATCCCCAAGACTTATCTCCCAGCTGGATCCTTAACCAAATAAAATACAGATACAAGCAGCTCACCATCCAGGTGCTGCTGGACAGGCTTGTGTTGCGGAGGCTTTACCCCCTGGCCATTCAGATATGTGAGTACCTGCGGCTTCCTGAAGTGCAGGGCGTCAGCAGAATCCTGGCCCACTGGGCCTGCTACAAGGTACAACAGAAGGACGTGTCTGACGAGGATGTTGCTCGAGCCATTAACCAGAAGCTGGGGGACACACCTGGTGTCTCTTACTCTGACATTGCTGCACGAGCCTATGGCTGTGGCCGCACGGAGCTGGCCATCAAGCTGCTGGAATATGAGCCACGCTCTGGGGAACAGGTTCCCCTTCTCCTAAAGATGAAGAGGAGCAAACTGGCACTAAGCAAGGCCATCGAGAGTGGGGATACTGACCTGGGTGAGCAGGGTTTGGGTGAGGACAAGGCTGGGGACCCTGGGCTGAGCAAGGGGCTGGGCTGGACCTGCATCCCACCTTATTGTCCCATAGTGTTCACGGTGCTGCTGCACCTGAAGAATGAGCTGAACCGAGGAGACTTTTTCATGACGCTTCGGAACCAGCCCATGGCCTTAAGTTTGTACCGACAGTTCTGTAAGCATCAAGAGCTAGAGACGCTGAAGGACCTTTACAATCAGGATGACAACCACCAGGAGCTGGGCAGCTTCCACATCCGAGCCAGCTACGCTGCAGAGGAGCGTATTGAGGGGCGAGTTGCAGCTCTGCAGACGGCAGCCGACGCATTCTCCAAGGCCAAGAATGAGTTTGCAGCCAAGGCCACAGAGGATCAAATGCGGCTCCTACGGCTGCAGCGACGCCTAGAAGATGAGCTGGGGGGCCGGTTCTTAGACCTGTCTCTACACGACACGGTCACCACCCTCATCCTCAGTGGCCAAAACAAGCGCGCAGAGCAGCTGGCACGTGACTTCCGCATCCCTGACAAGAGGCTCTGGTGGCTGAAGCTGACCGCCCTGGCAGATCTGGAAGACTGGGAGGAGCTAGAGAAGTTTTCTAAGAGCAAGAAATCACCCATCGGCTACCTGCCCTTTGTGGAAATCTGCATGAAGCAACACAACAAATATGAAGCCAAAAAGTATGCTTCCCGCGTGGGTCCCGAGCAGAAGGTCAAGGCCTTGCTTCTCGTTGGGGACGTGGCTCAGGCTGCAGACGTTGCCATCGAGCACCGGAATGAGGCAGAGATGAGCCTCGTATTTTCCCACTGCACCGGAGCCACAGATGGGCCCACGGCTGACAAGATTCAGCGGGCCCGGGCTCAAGCCCAGAAGAAGTGA

Related Sequences

bmy_07660T0 SequenceType object (3)

Length: 931 aa      View alignments
>bmy_07660T0
MEALGAPLGLSPSGCRVMTSLISVCHCVGRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPGRKEKPACARPVLEIYSASGVPLASLLWKSGPMVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRHFSMGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCWTTVCQDRVAHILLAVGPDLYLLDHAACSSVIPPGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAIVVAWERRLMVVGDAPEGIQYPWRAAGGEEGEGGSPALPHLWVLLGTLTKLRFVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKESQKADEYLREIQELGQLPQAVQQCIEAAGHEHWPDMQKSLLRAASFGKCFLDRFPPDSFVRMCQDLRVLNAIRDYHIGIPLTYSQYPQDLSPSWILNQIKYRYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQGVSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLGEQGLGEDKAGDPGLSKGLGWTCIPPYCPIVFTVLLHLKNELNRGDFFMTLRNQPMALSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFSKAKNEFAAKATEDQMRLLRLQRRLEDELGGRFLDLSLHDTVTTLILSGQNKRAEQLARDFRIPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVGPEQKVKALLLVGDVAQAADVAIEHRNEAEMSLVFSHCTGATDGPTADKIQRARAQAQKK*