Part of scaffold_321 (Scaffold)

For more information consult the page for scaffold_321 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C20ORF29 ENSBTAG00000008439 (Cow)

Gene Details

protein C20orf29 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011104, Cow)

Protein Percentage 88.27%
cDNA percentage 89.8%
Ka/Ks Ratio 0.31709 (Ka = 0.0743, Ks = 0.2345)

AP5S1  (Minke Whale)

Gene Details

adaptor-related protein complex 5, sigma 1 subunit

External Links

Gene match (Identifier: BACU016895, Minke Whale)

Protein Percentage 97.96%
cDNA percentage 97.45%
Ka/Ks Ratio 0.40742 (Ka = 0.0194, Ks = 0.0477)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 693 bp    Location:1247871..1250926   Strand:+
>bmy_07686
TGCTACTGGCGTGCGCAACCGCCATATCTACCGTTTAGCCGAGTGAAGGGGCCTATTAGTAGAAGTCCGTGGGCACGGAAGAAAAGCATCCATCCCAGAGCCATGGTCCATGTCTTCCTCATCCACACCTTGCGGGCCACGAAGGCTGAGGAGGGCCTTTGCCGAGTGCTCTACTCCTGCTTCTTTGGTACCGAGAATTCACCCAACGACCCACAGCCACATGGTGCTGAGAGGGACAGGCTCCTCCGAAAGGAGCAGATTTTGGCCGTGGCCAGACCCAGTCTGAACCAGCAGCAGCAGGCGTGCGGCCGGCCTGCTGTGGACCTGCAGCCCCAGTCCTCAGATGACCCAGTGCGCCTGCATGAGTCCCCATGTGGGGCCTTCCGCCTGACGGCAGGGGACCCTTTCCAGGAGCCTCGGACAGTGGTGTGGCTAGGCGTGCTCTCATTAGGCTTCGCCCTGGTGCTGAATGCCCACGAGAACCTGCTGCTGGCAGAGGGCACGCTTCGGCTGCTGGCCCGCCTTCTCCTTGAGCACCTCCGGCTGCTGGTCCCCACTGCCAACCTCCTGCTGCGGGCTGACTGCATCGAGGGCATCCTCGCCCGCTTCCTGCCCCATGGTCAGCTGCTATTCCTGAATGACCAGTTTGTCCAGGGTCTGGAGAAAGAATTCAGTGCTGCCTGGCCCCGCTGA

Related Sequences

bmy_07686T0 Protein

Length: 231 aa      View alignments
>bmy_07686T0
CYWRAQPPYLPFSRVKGPISRSPWARKKSIHPRAMVHVFLIHTLRATKAEEGLCRVLYSCFFGTENSPNDPQPHGAERDRLLRKEQILAVARPSLNQQQQACGRPAVDLQPQSSDDPVRLHESPCGAFRLTAGDPFQEPRTVVWLGVLSLGFALVLNAHENLLLAEGTLRLLARLLLEHLRLLVPTANLLLRADCIEGILARFLPHGQLLFLNDQFVQGLEKEFSAAWPR*