Sequence detailsbmy_07686 (Coding sequence)

Part of scaffold_321 (SequenceType object (1))

For more information consult the page for scaffold_321 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C20ORF29ENSBTAG00000008439 (Cow)

Gene Details

protein C20orf29 homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000011104, Cow)

Protein Percentage 88.27%
cDNA percentage 89.8%
Ka/Ks Ratio 0.31709 (Ka = 0.0743, Ks = 0.2345)

AP5S1 (Minke Whale)

Gene Details

adaptor-related protein complex 5, sigma 1 subunit

External Links

Gene match (Identifier: BACU016895, Minke Whale)

Protein Percentage 97.96%
cDNA percentage 97.45%
Ka/Ks Ratio 0.40742 (Ka = 0.0194, Ks = 0.0477)

Additional orthologs identified in other species via the OPTIC pipeline.

AP5S1 (Human)   Ap5s1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 693 bp    Location:1247871..1250926   Strand:+
Raw sequence 
>bmy_07686
TGCTACTGGCGTGCGCAACCGCCATATCTACCGTTTAGCCGAGTGAAGGGGCCTATTAGTAGAAGTCCGTGGGCACGGAAGAAAAGCATCCATCCCAGAGCCATGGTCCATGTCTTCCTCATCCACACCTTGCGGGCCACGAAGGCTGAGGAGGGCCTTTGCCGAGTGCTCTACTCCTGCTTCTTTGGTACCGAGAATTCACCCAACGACCCACAGCCACATGGTGCTGAGAGGGACAGGCTCCTCCGAAAGGAGCAGATTTTGGCCGTGGCCAGACCCAGTCTGAACCAGCAGCAGCAGGCGTGCGGCCGGCCTGCTGTGGACCTGCAGCCCCAGTCCTCAGATGACCCAGTGCGCCTGCATGAGTCCCCATGTGGGGCCTTCCGCCTGACGGCAGGGGACCCTTTCCAGGAGCCTCGGACAGTGGTGTGGCTAGGCGTGCTCTCATTAGGCTTCGCCCTGGTGCTGAATGCCCACGAGAACCTGCTGCTGGCAGAGGGCACGCTTCGGCTGCTGGCCCGCCTTCTCCTTGAGCACCTCCGGCTGCTGGTCCCCACTGCCAACCTCCTGCTGCGGGCTGACTGCATCGAGGGCATCCTCGCCCGCTTCCTGCCCCATGGTCAGCTGCTATTCCTGAATGACCAGTTTGTCCAGGGTCTGGAGAAAGAATTCAGTGCTGCCTGGCCCCGCTGA

Related Sequences

bmy_07686T0 SequenceType object (3)

Length: 231 aa      View alignments
>bmy_07686T0
CYWRAQPPYLPFSRVKGPISRSPWARKKSIHPRAMVHVFLIHTLRATKAEEGLCRVLYSCFFGTENSPNDPQPHGAERDRLLRKEQILAVARPSLNQQQQACGRPAVDLQPQSSDDPVRLHESPCGAFRLTAGDPFQEPRTVVWLGVLSLGFALVLNAHENLLLAEGTLRLLARLLLEHLRLLVPTANLLLRADCIEGILARFLPHGQLLFLNDQFVQGLEKEFSAAWPR*