Part of scaffold_330 (Scaffold)

For more information consult the page for scaffold_330 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLOD2 ENSTTRG00000015616 (Bottlenosed dolphin)

Gene Details

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014804, Bottlenosed dolphin)

Protein Percentage 79.91%
cDNA percentage 79.77%
Ka/Ks Ratio 0.17332 (Ka = 0.0202, Ks = 0.1165)

PLOD2 ENSBTAG00000007331 (Cow)

Gene Details

procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000031895, Cow)

Protein Percentage 94.98%
cDNA percentage 94.47%
Ka/Ks Ratio 0.13382 (Ka = 0.0259, Ks = 0.1933)

PLOD2  (Minke Whale)

Gene Details

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2

External Links

Gene match (Identifier: BACU012787, Minke Whale)

Protein Percentage 96.72%
cDNA percentage 97.45%
Ka/Ks Ratio 0.31973 (Ka = 0.0187, Ks = 0.0583)

Genome Location

Sequence Coding sequence

Length: 1377 bp    Location:989876..968327   Strand:-
>bmy_07694
ATGCTAATTCTAATTTGCTTTTATGTTTGCCACAAAACAAAGGTTCACCCAAATGTAACAATAGGTGTTTTTATTGAGCAACCAACCCCTTTCCTACCTCGATTTCTGGACATATTGTTGACACTGGATTACCCAAAAGAAGCAGTTAAACTCTTTATTCATAACAAAGAAGTTTATCATGAAAAGGACATCAAGGTGTTTTTTGATAAAGCTAAACATGAAATCACTACTATGAAAATAGTAGGACCGGAAGAAAATCTAAGTCAAGCAGAAGCCAGAAACATGGGAATGGATTTTTGCCGTCAGGATGAAAACTGTGATTATTACTTTAGTGTGGATGCAGATGTTGTTTTGACAAATCCAAGGACTTTAAAAATTTTGATTGAACAAAACAGAAAGATCATTGCTCCTCTTGTAACTCGTCATGGAAAGCTGTGGTCCAACTTCTGGGGGGCCTTGAGTCCTGATGGATACTACTCTCGATCTGAAGATTATGTGGATATTGTTCAAGGGAAYAGAGTAGGGATATGGAATGTCCCATACATGGCTAACGTGTACTTAATTAAAGGAAAGACACTCCGATCAGAGATGAATGAAAGGAACTATTTTGTTCGTGATAAATTGGATCCTGATATGGCTCTTTGCCGAAATGCTAGAGAAATGGGTGTGTTTATGTACATTTCTAATAGACATGAATTTGGAAGACTATTATCAACTGCTAATTATAATATTTCCCATTATAACAATGACCTCTGGCAGATTTTTGAAAATCCTGTGGACTGGAAGGAAAAGTATATAAACCGAGATTATTCAAAGATTTTCACTGAAAATATAGTTGAACAGCCTTGTCCAGATGTTTTTTGGTTTCCTATATTTTCTGAAAAAGCCTGCGATGAATTGGTGGAAGAAATGGAGCATTATGGCCAGTGGTCTGGGGGGAAACATCATGATAGCCGTATATCTGGTGGTTATGAAAATGTCCCAACTGATGATATCCACATGAAGCAAATTGGTCTGGAGAATGTATGGCTTCATTTTATCCGGGAATTTATTGCGCCTGTTACGCTGAAGGTCTTTGCAGGCTATTATACTAAGGGGTTTGCACTATTGAATTTTGTAGTAAAATACTCCCCTGAAAGACAACGCTCTCTTCGCCCTCATCATGACGCTTCTACATTTACCATCAACATTGCACTCAATAATGTGGGAGAAGATTTTCAGGGTGGTGGATGCAAATTTCTAAGGTACAATTGCTCTATTGAGTCACCAAGAAAAGGCTGGAGTTTCATGCATCCAGGGAGACTCACGCATTTGCATGAAGGACTTCCTGTTAAAAATGGAACTAGATACATCGCCGTGTCATTTATAGATCCCTAA

Related Sequences

bmy_07694T0 Protein

Length: 459 aa      View alignments
>bmy_07694T0
MLILICFYVCHKTKVHPNVTIGVFIEQPTPFLPRFLDILLTLDYPKEAVKLFIHNKEVYHEKDIKVFFDKAKHEITTMKIVGPEENLSQAEARNMGMDFCRQDENCDYYFSVDADVVLTNPRTLKILIEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYSRSEDYVDIVQGNRVGIWNVPYMANVYLIKGKTLRSEMNERNYFVRDKLDPDMALCRNAREMGVFMYISNRHEFGRLLSTANYNISHYNNDLWQIFENPVDWKEKYINRDYSKIFTENIVEQPCPDVFWFPIFSEKACDELVEEMEHYGQWSGGKHHDSRISGGYENVPTDDIHMKQIGLENVWLHFIREFIAPVTLKVFAGYYTKGFALLNFVVKYSPERQRSLRPHHDASTFTINIALNNVGEDFQGGGCKFLRYNCSIESPRKGWSFMHPGRLTHLHEGLPVKNGTRYIAVSFIDP*