Part of scaffold_318 (Scaffold)

For more information consult the page for scaffold_318 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ACTN1 ENSTTRG00000012305 (Bottlenosed dolphin)

Gene Details

actinin, alpha 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011672, Bottlenosed dolphin)

Protein Percentage 94.44%
cDNA percentage 93.88%
Ka/Ks Ratio 0.08539 (Ka = 0.0075, Ks = 0.0882)

ACTN1 ENSBTAG00000018255 (Cow)

Gene Details

Alpha-actinin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024301, Cow)

Protein Percentage 99.17%
cDNA percentage 96.11%
Ka/Ks Ratio 0.02451 (Ka = 0.0062, Ks = 0.2526)

ACTN1  (Minke Whale)

Gene Details

actinin, alpha 1

External Links

Gene match (Identifier: BACU010759, Minke Whale)

Protein Percentage 99.39%
cDNA percentage 98.98%
Ka/Ks Ratio 0.09268 (Ka = 0.0042, Ks = 0.0454)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2163 bp    Location:689579..786625   Strand:+
>bmy_07724
ATGGACCATTATGATTCCCAGCAAACCAATGACTACATGCAGCCCGAGGAGGACTGGGATCGAGACCTGCTCCTGGACCCAGCCTGGGAGAAGCAGCAGAGAAAGACGTTTACAGCATGGTGCAACTCCCACCTCCGGAAGGCAGGGACGCAGATCGAGAACATCGAGGAGGACTTCCGGGATGGCCTGAAGCTGATGCTGCTGCTGGAGGTCATCTCAGGTGAACGCTTGGCCAAGCCGGAGAGAGGCAAAATGAGGGTGCACAAGATCTCCAATGTCAACAAGGCCCTGGACTTCATAGCCAGCAAGGGGGTCAAGCTGGTGTCCATAGGAGCTGAAGAAATCGTGGATGGGAACGTGAAAATGACCCTGGGCATGATCTGGACCATCATCCTCCGCTTTGCCATCCAGGACATCTCCGTGGAAGAGACTTCAGCRAAGGAAGGGCTGCTCTTGTGGTGTCAGAGAAAGACAGCCCCTTACAAAAACGTCAACATCCAGAACTTCCACATAAGATTTTTCTTGACAGACATCGTCGGAACCGCCCGCCCGGATGAGAAAGCCATCATGACTTACGTGTCCAGCTTCTACCACGCCTTCTCTGGAGCCCAGAAGGCCGAGACAGCCGCCAATCGCATCTGCAAGGTGCTGGCCGTCAACCAGGAGAATGAGCAGCTCATGGAAGACTACGAGAAGCTGGCCAGTGATCTGCTGGAGTGGATCCGCCGCACCATCCCGTGGCTGGAGAACCGGGCGCCCGAGAACACCATGCACGCCATGCAGCAGAAGCTGGAGGACTTCCGCGACTACCGGCGCCTGCACAAGCCGCCCAAGGACATCAACAACGCCTGGGGTTGCCTGGAGCAGGCAGAGAAGGGCTATGAGGAGTGGCTGCTGAATGAGATACGGAGGCTGGAGCGGCTCGACCACCTGGCAGAGAAGTTCCGGCAGAAGGCCTCCATCCATGAGGCCTGGACGGACGGCAAAGAGGCCATGCTGCGGCAGAAGGATTACGAGACGGCCACCCTCTCAGAGATCAAGGCCCTGCTCAAGAAGCACGAGGCCTTCGAGAGCGACCTGGCCGCCCACCAGGACCGCGTGGAGCAGATCGCCGCCATTGCGCAGGAGCTCAATGAGCTGGACTATTACGACTCACCCAGTGTCAACGCCCGGTGCCAAAAGATCTGTGACCAGTGGGACAATCTGGGGGCCCTAACCCAGAAGCGGAGGGAAGCTCTGGAGCGGACAGAGAAACTGCTGGAGACCATTGACCAGCTGTACTTGGAATATGCCAAGCGGGCCGCACCCTTCAACAACTGGATGGAGGGGGCCATGGAGGACCTGCAGGACACCTTCATCGTGCACACTATCGAGGAGATCCAGGTACGGCAGCTGGTGCCTCGGAGGGACCAGGCCCTGACGGAGGAGCACGCCCGCCAGCAGCACAACGAGAGGCTACGCAAGCAGTTTGCGGCCCAGGCCAACGTCATCGGGCCCTGGATCCAGACCAAGATGGAGGAGATTGGGAGGATCTCCATTGAGATGCACGGGACCCTGGAGGACCAGCTCTGCCACCTGCGGCAATACGAGAAGAGCATCGTCAACTACAAGCCCAAGATCGACCAGCTGGAGGGCGACCACCAGCTCATCCAGGAGGCACTCATCTTCGACAACAAGCACACCAACTACACCATGGAGCACATCCGCGTGGGCTGGGAGCAACTCCTCACCACCATCGCCAGGACCATCAACGAGGTGGAGAACCAGATCCTGACCAGGGATGCCAAGGGCATCAGCCAGGAGCAGATGAACGAGTTCCGGGCTTCCTTCAACCACTTTGACCGGGGAGAGGCAGAATTTGCCCGCATCATGAGCATTGTGGACCCCAACCGCCTAGGGGTAGTGACGTTCCAGGCCTTCATCGACTTTATGTCCCGTGAGACGGCTGACACAGATACAGCAGACCAAGTCATGGCTTCCTTCAAGATCCTGGCCGGGGATAAGAACTACATCACTGTGGACGAGCTGCGCCGTGAGCTGCCGCCTGACCAGGCCGAGTACTGCATCGCGCGAATGGCCCCCTACACCGGCCCCGACGCCGTGCCCGGTGCTCTGGACTACATGTCCTTCTCCACGGCGCTGTACGGCGAGAGTGACCTCTAG

Related Sequences

bmy_07724T0 Protein

Length: 721 aa      View alignments
>bmy_07724T0
MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHIRFFLTDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRAPENTMHAMQQKLEDFRDYRRLHKPPKDINNAWGCLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQVRQLVPRRDQALTEEHARQQHNERLRKQFAAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLCHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITVDELRRELPPDQAEYCIARMAPYTGPDAVPGALDYMSFSTALYGESDL*