Part of scaffold_318 (Scaffold)

For more information consult the page for scaffold_318 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZFP36L1 ENSTTRG00000003475 (Bottlenosed dolphin)

Gene Details

ZFP36 ring finger protein-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003257, Bottlenosed dolphin)

Protein Percentage 94.74%
cDNA percentage 95.37%
Ka/Ks Ratio 0.229 (Ka = 0.0323, Ks = 0.1409)

ZFP36L1 ENSBTAG00000025434 (Cow)

Gene Details

zinc finger protein 36, C3H1 type-like 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000035611, Cow)

Protein Percentage 95.22%
cDNA percentage 93.94%
Ka/Ks Ratio 0.10965 (Ka = 0.03, Ks = 0.2733)

ZFP36L1  (Minke Whale)

Gene Details

ZFP36 ring finger protein-like 1

External Links

Gene match (Identifier: BACU010756, Minke Whale)

Protein Percentage 95.69%
cDNA percentage 96.33%
Ka/Ks Ratio 0.28742 (Ka = 0.0282, Ks = 0.098)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 630 bp    Location:846390..850578   Strand:+
>bmy_07725
ATGACCACCACCCTCGTGTCTGCCACCATCTTCGACTTGAGCGAAGTTTTATGCAAGGGTAACAAGATGCTCAACTACAGTACTCCCAGTGCCGGGGGCTGCCTGCTGGACAGGAAGGCGGTGGGCACCCCTGCCGGTGGGGGCTTCCCCCGGAGGCACTCGGTCACCCTGCCCAGCTCCAAGTTCCACCAGAACCAGCTCCTCAGCAGCCTCAAGGGCGAGCCAGCTCCAGCTCTGAGCTCTCGGGACAGCCGCTTCCGAGACCGCTCCTTCTCAGAAGGGGGCGAGCGGCTGCTGCCCACCCAGAAGCAGCCGGGGAGCGGCCAGGTCAACTCCAGCCGCTACAAGACGGAGCTGTGCCGCCCCTTCGAGGAGAACGGAGCCTGTAAGTACGGCGACAAGTGCCAGTTCGCGCACGGCATCCACGAGCTCCGAAGCCTGACCCGCCACCCCAAGTACAAGACGGAGCTGTGCCGTACCTTCCACACCATCGGCTTCTGCCCGTATGGGCCCCGCTGCCACTTCATCCACAACGCTGAGGAGCGCCGTGCCCTGGCCGGGGCCCGGGACCTCTCTGCTGACCGTCTGCAGGAAGGAAGACTGCAAAAGCGGATGAAGATTGTGACATAA

Related Sequences

bmy_07725T0 Protein

Length: 210 aa      View alignments
>bmy_07725T0
MTTTLVSATIFDLSEVLCKGNKMLNYSTPSAGGCLLDRKAVGTPAGGGFPRRHSVTLPSSKFHQNQLLSSLKGEPAPALSSRDSRFRDRSFSEGGERLLPTQKQPGSGQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELRSLTRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRALAGARDLSADRLQEGRLQKRMKIVT*